RiboswitchDB

Genome: Thermovibrio ammonificans HB-1 (NC_014926.1); Phylum: Aquificae

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

63881-63989 (-)

TPP

63018-63825 (-)

Theam_0077

Thiamine thiazole synthase

Operon

DOOR ID: 794276

Theam_0072,
Theam_0073,
Theam_0074,
Theam_0075,
Theam_0076,
Theam_0077

2

181268-181482 (+)

cobalamin

181512-182265 (+)

Theam_0192

Periplasmic binding protein

Operon

DOOR ID: 794305

Theam_0192,
Theam_0193,
Theam_0194,
Theam_0195

3

736996-737116 (-)

MOCO

736227-736941 (-)

Theam_0789

Molybdenum ABC transporter; periplasmic molybdate-binding protein

Operon

DOOR ID: 794430

Theam_0785,
Theam_0786,
Theam_0787,
Theam_0788,
Theam_0789

4

1519455-1519656 (+)

cobalamin

1519778-1521941 (+)

Theam_1561

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4)

Single gene

DOOR ID: 3031753

Theam_1561

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