Genome: Mesorhizobium ciceri biovar biserrulae WSM1271 (NC_014923.1); Phylum: Alphaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 440546-440748 (+)cobalamin440862-442110 (+)Mesci_0398

Rieske (2Fe-2S) iron-sulfur domain
Mesci_0398Operon

DOOR ID: 792054
Mesci_0398,
Mesci_0399
View Structure
2 636790-636837 (-)mini-ykkC636407-636722 (-)Mesci_0595

Mesci_0595Single gene

DOOR ID: 3027453
Mesci_0595 View Structure
3 680991-681060 (+)SAH682119-682878 (+)Mesci_0645

Short-chain dehydrogenase/reductase SDR
Mesci_0645Single gene

DOOR ID: 3027476
Mesci_0645 View Structure
4 1369056-1369170 (+)TPP1369213-1370212 (+)Mesci_1313

ABC transporter; periplasmic binding protein; thiB subfamily
Mesci_1313Operon

DOOR ID: 792240
Mesci_1313,
Mesci_1314,
Mesci_1315
View Structure
5 1594822-1594899 (-)sam-alpha1593537-1594707 (-)Mesci_1536

Homoserine O-acetyltransferase (HAT) (1) (Homoserine transacetylase) (HTA)
Mesci_1536Operon

DOOR ID: 792281
Mesci_1535,
Mesci_1536
View Structure
6 3097384-3097497 (+)TPP3097520-3098096 (+)Mesci_2983

YKOF domain-containing protein
Mesci_2983Single gene

DOOR ID: 3028482
Mesci_2983 View Structure
7 3428537-3428741 (-)cobalamin3428069-3428498 (-)Mesci_3282

Mesci_3282Operon

DOOR ID: 792601
Mesci_3276,
Mesci_3277,
Mesci_3278,
Mesci_3279,
Mesci_3280,
Mesci_3281,
Mesci_3282
View Structure
8 3461477-3461673 (+)cobalamin3461708-3461888 (+)Mesci_3313

Cobalt transporter; subunit CbtB
Mesci_3313Operon

DOOR ID: 792608
Mesci_3313,
Mesci_3314,
Mesci_3315,
Mesci_3316
View Structure
9 4320563-4320649 (+)glycine4320798-4321899 (+)Mesci_4178

Glycine cleavage system T protein
Mesci_4178Operon

DOOR ID: 792782
Mesci_4178,
Mesci_4179,
Mesci_4180
View Structure
10 4752745-4752952 (-)cobalamin4751791-4752580 (-)Mesci_4613

ABC transporter related protein
Mesci_4613Operon

DOOR ID: 792865
Mesci_4611,
Mesci_4612,
Mesci_4613
View Structure
11 5191037-5191217 (+)cobalamin5191315-5192215 (+)Mesci_5041

Cob(II)yrinic acid a;c-diamide reductase
Mesci_5041Single gene

DOOR ID: 3029340
Mesci_5041 View Structure
12 5216507-5216574 (-)SAH5214510-5215941 (-)Mesci_5065

FAD linked oxidase domain protein
Mesci_5065Operon

DOOR ID: 792957
Mesci_5065,
Mesci_5066
View Structure
13 5334255-5334469 (+)FMN5334546-5335020 (+)Mesci_5177

6;7-dimethyl-8-ribityllumazine synthase (DMRL synthase) (LS) (Lumazine synthase) (8)
Mesci_5177Single gene

DOOR ID: 3029397
Mesci_5177 View Structure
14 6114653-6114746 (-)glycine6112986-6113430 (+)Mesci_5905

GCN5-related N-acetyltransferase
Mesci_5905Single gene

DOOR ID: 3029610
Mesci_5905 View Structure
15 6198441-6198518 (+)sam-alpha6198575-6199763 (+)Mesci_5982

O-succinylhomoserine sulfhydrylase (OSH sulfhydrylase) (OSHS sulfhydrylase)
Mesci_5982Single gene

DOOR ID: 3029639
Mesci_5982 View Structure