Genome: Geobacillus sp. Y412MC52 (NC_014915.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 167750-167921 (+)glmS168046-169849 (+)GYMC52_0155

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		GYMC52_0155Single gene

DOOR ID: 3024282		GYMC52_0155 View Structure
2 208303-208443 (+)ydaO-yuaA208547-210383 (+)GYMC52_0190

GYMC52_0190Single gene

DOOR ID: 3024295		GYMC52_0190 View Structure
3 266218-266319 (-)purine264791-266117 (-)GYMC52_0238

Xanthine/uracil/vitamin C permease		GYMC52_0238Single gene

DOOR ID: 3024317		GYMC52_0238 View Structure
4 268002-268103 (-)purine266407-267940 (-)GYMC52_0239

GMP synthase [glutamine-hydrolyzing] (GMP synthetase) (Glutamine amidotransferase)		GYMC52_0239Single gene

DOOR ID: 3024318		GYMC52_0239 View Structure
5 280403-280504 (+)purine280614-281103 (+)GYMC52_0251

N5-carboxyaminoimidazole ribonucleotide mutase (N5-CAIR mutase) (8) (5-(carboxyamino)imidazole ribonucleotide mutase)		GYMC52_0251Operon

DOOR ID: 790250		GYMC52_0251,
GYMC52_0252,
GYMC52_0253,
GYMC52_0254,
GYMC52_0255,
GYMC52_0256,
GYMC52_0257,
GYMC52_0258,
GYMC52_0259,
GYMC52_0260,
GYMC52_0261,
GYMC52_0262		 View Structure
6 414112-414225 (+)TPP414396-416085 (+)GYMC52_0371

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		GYMC52_0371Single gene

DOOR ID: 3024358		GYMC52_0371 View Structure
7 461293-461397 (-)SAM460459-461167 (-)GYMC52_0415

Phosphoadenosine phosphosulfate reductase (3'-phosphoadenylylsulfate reductase) (PAPS reductase; thioredoxin dependent) (PAPS sulfotransferase) (PAdoPS reductase)		GYMC52_0415Operon

DOOR ID: 790284		GYMC52_0410,
GYMC52_0411,
GYMC52_0412,
GYMC52_0413,
GYMC52_0414,
GYMC52_0415		 View Structure
8 566269-566372 (+)ykkC-yxkD566430-566751 (+)GYMC52_0519

Small multidrug resistance protein		GYMC52_0519Single gene

DOOR ID: 3024430		GYMC52_0519 View Structure
9 566836-566922 (+)yybP-ykoY567083-567470 (+)GYMC52_0520

GYMC52_0520Single gene

DOOR ID: 3024431		GYMC52_0520 View Structure
10 579304-579411 (+)TPP579517-580201 (+)GYMC52_0531

Aminopyrimidine aminohydrolase 		GYMC52_0531Operon

DOOR ID: 790306		GYMC52_0531,
GYMC52_0532,
GYMC52_0533,
GYMC52_0534,
GYMC52_0535,
GYMC52_0536,
GYMC52_0537,
GYMC52_0538,
GYMC52_0539,
GYMC52_0540		 View Structure
11 700895-700997 (-)SAM698975-700823 (-)GYMC52_0646

Homocysteine S-methyltransferase		GYMC52_0646Operon

DOOR ID: 790322		GYMC52_0645,
GYMC52_0646		 View Structure
12 824771-824881 (+)SAM825082-826186 (+)GYMC52_0792

Cys/Met metabolism pyridoxal-phosphate-dependent protein		GYMC52_0792Operon

DOOR ID: 790350		GYMC52_0792,
GYMC52_0793		 View Structure
13 862882-863077 (+)cobalamin863131-865489 (+)GYMC52_0826

Ribonucleoside-diphosphate reductase 		GYMC52_0826Operon

DOOR ID: 790355		GYMC52_0826,
GYMC52_0827		 View Structure
14 907495-907663 (-)SAM906165-907356 (-)GYMC52_0868

Methylthioribose kinase (MTR kinase) (00)		GYMC52_0868Operon

DOOR ID: 790365		GYMC52_0867,
GYMC52_0868		 View Structure
15 909940-910048 (+)SAM910119-911361 (+)GYMC52_0871

2;3-diketo-5-methylthiopentyl-1-phosphate enolase (DK-MTP-1-P enolase) (RuBisCO-like protein) (RLP)		GYMC52_0871Operon

DOOR ID: 790366		GYMC52_0871,
GYMC52_0872,
GYMC52_0873		 View Structure
16 919611-919792 (-)lysine918094-919567 (-)GYMC52_0880

Amino acid permease-associated region protein		GYMC52_0880Single gene

DOOR ID: 3024592		GYMC52_0880 View Structure
17 937234-937279 (+)PreQ1937353-938025 (+)GYMC52_0896

7-cyano-7-deazaguanine synthase (0) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC)		GYMC52_0896Operon

DOOR ID: 790370		GYMC52_0896,
GYMC52_0897,
GYMC52_0898,
GYMC52_0899		 View Structure
18 1313866-1313970 (+)SAM1314040-1314376 (+)GYMC52_1279

GYMC52_1279Operon

DOOR ID: 790441		GYMC52_1279,
GYMC52_1280		 View Structure
19 1571963-1572064 (+)purine1572180-1572768 (+)GYMC52_1514

Xanthine phosphoribosyltransferase (XPRTase) (2)		GYMC52_1514Operon

DOOR ID: 790490		GYMC52_1514,
GYMC52_1515		 View Structure
20 1750365-1750497 (-)FMN1749623-1750208 (-)GYMC52_1702

Riboflavin transporter		GYMC52_1702Single gene

DOOR ID: 3024912		GYMC52_1702 View Structure
21 1793925-1794119 (-)cobalamin1793345-1793744 (-)GYMC52_1753

Putative ferredoxin		GYMC52_1753Operon

DOOR ID: 790528		GYMC52_1749,
GYMC52_1750,
GYMC52_1751,
GYMC52_1752,
GYMC52_1753		 View Structure
22 2310618-2310817 (-)cobalamin2309520-2310477 (-)GYMC52_2246

Periplasmic binding protein		GYMC52_2246Operon

DOOR ID: 790622		GYMC52_2235,
GYMC52_2236,
GYMC52_2237,
GYMC52_2238,
GYMC52_2239,
GYMC52_2240,
GYMC52_2241,
GYMC52_2242,
GYMC52_2243,
GYMC52_2244,
GYMC52_2245,
GYMC52_2246		 View Structure
23 2340983-2341115 (-)FMN2339632-2340775 (-)GYMC52_2277

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		GYMC52_2277Operon

DOOR ID: 790630		GYMC52_2274,
GYMC52_2275,
GYMC52_2276,
GYMC52_2277		 View Structure
24 2520621-2520709 (-)glycine2519338-2520433 (-)GYMC52_2454

Aminomethyltransferase (0) (Glycine cleavage system T protein)		GYMC52_2454Operon

DOOR ID: 790661		GYMC52_2452,
GYMC52_2453,
GYMC52_2454		 View Structure
25 2795058-2795120 (-)fluoride2794622-2795012 (-)GYMC52_2738

Putative fluoride ion transporter CrcB		GYMC52_2738Operon

DOOR ID: 790725		GYMC52_2737,
GYMC52_2738		 View Structure
26 2956577-2956691 (-)SAM2955235-2956447 (-)GYMC52_2895

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		GYMC52_2895Single gene

DOOR ID: 3025333		GYMC52_2895 View Structure
27 3137734-3137843 (-)SAM3136617-3137646 (-)GYMC52_3104

Methionine import ATP-binding protein MetN 		GYMC52_3104Operon

DOOR ID: 790787		GYMC52_3102,
GYMC52_3103,
GYMC52_3104		 View Structure
28 3240798-3240883 (+)c-di-GMP-I3240923-3241784 (+)GYMC52_3212

Uncharacterized protein		GYMC52_3212single gene

DOOR ID: 3025455		GYMC52_3212 View Structure
29 3342843-3342925 (-)c-di-GMP-I3342090-3342816 (-)GYMC52_3306

Uncharacterized protein		GYMC52_3306single gene

DOOR ID: 3025483		GYMC52_3306 View Structure