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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
1094444-1094625
(-)
cobalamin
1092207-1094268 (-)
Daes_0971
Anaerobic ribonucleoside-triphosphate reductase
Daes_0971
Operon
DOOR ID:
788263
Daes_0970,
Daes_0971
View Structure
2
1443146-1443248
(+)
TPP
1443328-1443529 (+)
Daes_1266
Thiamine biosynthesis protein ThiS
Daes_1266
Operon
DOOR ID:
788322
Daes_1266,
Daes_1267,
Daes_1268,
Daes_1269,
Daes_1270,
Daes_1271
View Structure
3
2496706-2496885
(+)
cobalamin
2497021-2498023 (+)
Daes_2291
Anaerobic cobalt chelatase
Daes_2291
Operon
DOOR ID:
788548
Daes_2291,
Daes_2292,
Daes_2293,
Daes_2294,
Daes_2295,
Daes_2296
View Structure
4
2774783-2774858
(-)
c-di-GMP-I
2772866-2774630 (-)
Daes_2564
Polypeptide-transport-associated domain protein ShlB-type
Daes_2564
operon
DOOR ID:
788600
Daes_2562,
Daes_2563,
Daes_2564
View Structure
5
2830431-2830611
(+)
cobalamin
2830710-2832996 (+)
Daes_2625
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)
Daes_2625
Single gene
DOOR ID:
3022147
Daes_2625
View Structure
6
2985266-2985414
(+)
FMN
2985548-2986202 (+)
Daes_2754
3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
Daes_2754
Single gene
DOOR ID:
3022193
Daes_2754
View Structure
7
3315128-3315258
(-)
c-di-GMP-I
3314042-3315050 (-)
Daes_3065
Metal-dependent phosphohydrolase HD sub domain protein
Daes_3065
single gene
DOOR ID:
3022296
Daes_3065
View Structure
Genome:
Desulfovibrio aespoeensis Aspo-2
(
NC_014844.1
);
Phylum:
delta/epsilon subdivisions
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