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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
470205-470354
(-)
FMN
469544-470123 (-)
Rumal_0428
Riboflavin transporter
Rumal_0428
Single gene
DOOR ID:
3015430
Rumal_0428
View Structure
2
1531889-1531987
(+)
THF
1532121-1533393 (+)
Rumal_1336
FolC bifunctional protein (7)
Rumal_1336
Single gene
DOOR ID:
3015724
Rumal_1336
View Structure
3
1537164-1537238
(-)
fluoride
1535917-1537123 (-)
Rumal_1338
Sodium/hydrogen exchanger
Rumal_1338
Single gene
DOOR ID:
3015726
Rumal_1338
View Structure
4
1557401-1557482
(+)
c-di-GMP-I
1557692-1558397 (+)
Rumal_1351
Uncharacterized protein
Rumal_1351
operon
DOOR ID:
785043
Rumal_1351,
Rumal_1352
View Structure
5
1868315-1868434
(+)
FMN
1868520-1869630 (+)
Rumal_1618
Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
Rumal_1618
Operon
DOOR ID:
785101
Rumal_1618,
Rumal_1619,
Rumal_1620,
Rumal_1621
View Structure
6
2417242-2417350
(+)
TPP
2417400-2417595 (+)
Rumal_2155
Thiamine biosynthesis protein ThiS
Rumal_2155
Operon
DOOR ID:
785220
Rumal_2155,
Rumal_2156,
Rumal_2157,
Rumal_2158,
Rumal_2159,
Rumal_2160,
Rumal_2161,
Rumal_2162
View Structure
7
2493674-2493871
(-)
lysine
2492421-2493507 (-)
Rumal_2228
Aspartate-semialdehyde dehydrogenase (1)
Rumal_2228
Operon
DOOR ID:
785232
Rumal_2226,
Rumal_2227,
Rumal_2228
View Structure
8
3450681-3450807
(-)
SAM
3449377-3450550 (-)
Rumal_3069
S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)
Rumal_3069
Operon
DOOR ID:
785412
Rumal_3068,
Rumal_3069
View Structure
Genome:
Ruminococcus albus 7
(
NC_014833.1
);
Phylum:
Firmicutes
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