Genome: Intrasporangium calvum DSM 43043 (NC_014830.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 727226-727343 (-)SAH725334-726990 (+)Intca_0667

ResB family protein
Intca_0667Operon

DOOR ID: 783614
Intca_0662,
Intca_0663,
Intca_0664,
Intca_0665,
Intca_0666,
Intca_0667,
Intca_0668,
Intca_0669
View Structure
2 825714-825879 (+)ydaO-yuaA826809-827493 (+)Intca_0758

DSBA oxidoreductase
Intca_0758Single gene

DOOR ID: 3013494
Intca_0758 View Structure
3 867993-868067 (+)cobalamin868125-871791 (+)Intca_0798

Cobaltochelatase CobN subunit
Intca_0798Single gene

DOOR ID: 3013509
Intca_0798 View Structure
4 881392-881464 (-)cobalamin879145-881317 (-)Intca_0805

Protoporphyrin IX magnesium-chelatase
Intca_0805Operon

DOOR ID: 783635
Intca_0802,
Intca_0803,
Intca_0804,
Intca_0805
View Structure
5 883553-883678 (+)cobalamin883702-884389 (+)Intca_0808

Cobalt transport protein CbiM (Energy-coupling factor transporter probable substrate-capture protein CbiM) (ECF transporter S component CbiM)
Intca_0808Operon

DOOR ID: 783637
Intca_0808,
Intca_0809,
Intca_0810,
Intca_0811
View Structure
6 1176691-1176768 (+)ZMP-ZTP1176799-1178395 (+)Intca_1067

Bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (0) (ATIC) (IMP synthase) (Inosinicase)]
Intca_1067Single gene

DOOR ID: 3013598
Intca_1067 View Structure
7 1420824-1420939 (-)SAM-IV1419486-1420809 (-)Intca_1270

O-acetylhomoserine sulfhydrolase (9)
Intca_1270Operon

DOOR ID: 783739
Intca_1269,
Intca_1270
View Structure
8 1567825-1567936 (-)TPP1565889-1567119 (-)Intca_1403

Glycine oxidase ThiO
Intca_1403Operon

DOOR ID: 783777
Intca_1398,
Intca_1399,
Intca_1400,
Intca_1401,
Intca_1402,
Intca_1403,
Intca_1404
View Structure
9 1687460-1687573 (+)SAM-IV1687592-1688792 (+)Intca_1503

Homoserine O-acetyltransferase (HAT) (1) (Homoserine transacetylase) (HTA)
Intca_1503Single gene

DOOR ID: 3013724
Intca_1503 View Structure
10 1833014-1833154 (+)FMN1833273-1834035 (+)Intca_1620

Nicotinamide mononucleotide transporter PnuC
Intca_1620Operon

DOOR ID: 783819
Intca_1620,
Intca_1621,
Intca_1622,
Intca_1623,
Intca_1624
View Structure
11 1915672-1915753 (+)SAH1915942-1917178 (-)Intca_1690

Glucose-6-phosphate dehydrogenase subunit
Intca_1690Operon

DOOR ID: 783835
Intca_1689,
Intca_1690,
Intca_1691,
Intca_1692,
Intca_1693,
Intca_1694
View Structure
12 2048160-2048274 (-)glycine2045168-2048078 (-)Intca_1815

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))
Intca_1815Operon

DOOR ID: 783863
Intca_1814,
Intca_1815
View Structure
13 2250714-2250855 (+)cobalamin2250937-2251678 (+)Intca_2007

Intca_2007Operon

DOOR ID: 783913
Intca_2007,
Intca_2008,
Intca_2009,
Intca_2010,
Intca_2011,
Intca_2012
View Structure
14 2435003-2435129 (+)SAM-IV2435164-2436598 (+)Intca_2180

Cysteine desulfurase
Intca_2180Single gene

DOOR ID: 3013900
Intca_2180 View Structure
15 3224697-3224877 (-)ydaO-yuaA3224010-3224691 (-)Intca_2906

Transglycosylase-like domain protein
Intca_2906Single gene

DOOR ID: 3014126
Intca_2906 View Structure
16 3680651-3680767 (-)TPP3679893-3680529 (-)Intca_3327

ABC-type thiamin-related transport system; permease component 1; predicted
Intca_3327Operon

DOOR ID: 784219
Intca_3323,
Intca_3324,
Intca_3325,
Intca_3326,
Intca_3327
View Structure
17 3929829-3930034 (+)ydaO-yuaA3930036-3930912 (+)Intca_3567

CHAP domain containing protein
Intca_3567Single gene

DOOR ID: 3014333
Intca_3567 View Structure
18 3963353-3963449 (-)glycine3960266-3963206 (-)Intca_3595

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))
Intca_3595Operon

DOOR ID: 784275
Intca_3590,
Intca_3591,
Intca_3592,
Intca_3593,
Intca_3594,
Intca_3595
View Structure
19 3963626-3963730 (+)glycine3963860-3965378 (+)Intca_3596

D-serine/D-alanine/glycine:proton symporter; AAT family
Intca_3596Single gene

DOOR ID: 3014350
Intca_3596 View Structure