Genome: Ethanoligenens harbinense YUAN-3 (NC_014828.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 44570-44660 (+)c-di-GMP-I44816-47363 (+)Ethha_0041

Peptidase C1A papain		Ethha_0041single gene

DOOR ID: 3010375		Ethha_0041 View Structure
2 50181-50314 (+)FMN50400-50979 (+)Ethha_0044

Riboflavin transporter		Ethha_0044Single gene

DOOR ID: 3010378		Ethha_0044 View Structure
3 58090-58174 (-)c-di-GMP-I56508-57843 (+)Ethha_0050

Inorganic diphosphatase		Ethha_0050single gene

DOOR ID: 3010380		Ethha_0050 View Structure
4 207253-207362 (+)ZMP-ZTP207456-209007 (+)Ethha_0197

Bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (0) (ATIC) (IMP synthase) (Inosinicase)]		Ethha_0197Operon

DOOR ID: 782110		Ethha_0197,
Ethha_0198		 View Structure
5 245615-245713 (+)TPP245792-247091 (+)Ethha_0236

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		Ethha_0236Single gene

DOOR ID: 3010439		Ethha_0236 View Structure
6 458051-458208 (+)glmS458356-460162 (+)Ethha_0427

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		Ethha_0427Single gene

DOOR ID: 3010497		Ethha_0427 View Structure
7 470084-470160 (+)fluoride470243-471539 (+)Ethha_0432

Cl-channel voltage-gated family protein		Ethha_0432Single gene

DOOR ID: 3010499		Ethha_0432 View Structure
8 664787-664927 (-)FMN663509-664613 (-)Ethha_0637

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		Ethha_0637Operon

DOOR ID: 782193		Ethha_0634,
Ethha_0635,
Ethha_0636,
Ethha_0637		 View Structure
9 855172-855273 (+)Nico855382-857905 (+)Ethha_0782

ATPase; P-type (Transporting); HAD superfamily; subfamily IC		Ethha_0782Single gene

DOOR ID: 3010623		Ethha_0782 View Structure
10 1208321-1208521 (-)cobalamin1206435-1208178 (-)Ethha_1095

Ethha_1095Single gene

DOOR ID: 3010754		Ethha_1095 View Structure
11 1554426-1554601 (+)lysine1554760-1555843 (+)Ethha_1424

Aspartate-semialdehyde dehydrogenase (1)		Ethha_1424Operon

DOOR ID: 782356		Ethha_1424,
Ethha_1425,
Ethha_1426,
Ethha_1427		 View Structure
12 1631925-1632029 (+)TPP1632112-1632898 (+)Ethha_1496

Thiazole synthase (0)		Ethha_1496Operon

DOOR ID: 782373		Ethha_1496,
Ethha_1497,
Ethha_1498,
Ethha_1499		 View Structure
13 1795605-1795690 (-)ZMP-ZTP1793287-1795537 (-)Ethha_1657

Formate acetyltransferase (4)		Ethha_1657Operon

DOOR ID: 782408		Ethha_1656,
Ethha_1657		 View Structure
14 2083110-2083198 (+)c-di-GMP-I2083281-2084814 (-)Ethha_1945

Uncharacterized protein		Ethha_1945single gene

DOOR ID: 3011040		Ethha_1945 View Structure
15 2285686-2285871 (+)cobalamin2285948-2288228 (+)Ethha_2140

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)		Ethha_2140Operon

DOOR ID: 782508		Ethha_2140,
Ethha_2141		 View Structure
16 2414907-2415008 (+)THF2415077-2415602 (+)Ethha_2252

Ethha_2252Single gene

DOOR ID: 3011149		Ethha_2252 View Structure
17 2596987-2597091 (+)ykkC-yxkD2597153-2597870 (+)Ethha_2408

Urea carboxylase-associated protein 2		Ethha_2408Operon

DOOR ID: 782564		Ethha_2408,
Ethha_2409,
Ethha_2410,
Ethha_2411		 View Structure
18 2671393-2671496 (+)SAM2671571-2672753 (+)Ethha_2493

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		Ethha_2493Single gene

DOOR ID: 3011218		Ethha_2493 View Structure
19 2780493-2780677 (-)cobalamin2779286-2780447 (-)Ethha_2595

Ethha_2595Operon

DOOR ID: 782608		Ethha_2592,
Ethha_2593,
Ethha_2594,
Ethha_2595		 View Structure