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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
673754-673946
(+)
cobalamin
674046-675051 (+)
Astex_0636
Astex_0636
Operon
DOOR ID:
780835
Astex_0636,
Astex_0637
View Structure
2
1055441-1055553
(-)
TPP
1053484-1055338 (-)
Astex_1007
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
Astex_1007
Single gene
DOOR ID:
3008212
Astex_1007
View Structure
3
1221085-1221190
(-)
SAM
1220014-1220998 (-)
Astex_1168
Alpha/beta hydrolase fold protein
Astex_1168
Operon
DOOR ID:
780949
Astex_1167,
Astex_1168
View Structure
4
1689592-1689681
(-)
glycine
1688327-1689440 (-)
Astex_1563
Glycine cleavage system T protein
Astex_1563
Operon
DOOR ID:
781034
Astex_1561,
Astex_1562,
Astex_1563
View Structure
5
1792332-1792521
(+)
cobalamin
1792733-1794563 (+)
Astex_1664
TonB-dependent receptor
Astex_1664
Single gene
DOOR ID:
3008491
Astex_1664
View Structure
Genome:
Asticcacaulis excentricus CB 48 chromosome I
(
NC_014816.1
);
Phylum:
Alphaproteobacteria
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