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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
1411957-1412050
(-)
SAM
1410266-1411595 (-)
Ftrac_1143
O-acetylhomoserine sulfhydrolase (9)
Ftrac_1143
Operon
DOOR ID:
775221
Ftrac_1140,
Ftrac_1141,
Ftrac_1142,
Ftrac_1143
View Structure
2
2760220-2760313
(+)
TPP
2760357-2761083 (+)
Ftrac_2328
Methyltransferase type 11
Ftrac_2328
Operon
DOOR ID:
775488
Ftrac_2328,
Ftrac_2329,
Ftrac_2330,
Ftrac_2331
View Structure
3
3520991-3521094
(+)
SAM
3521380-3522553 (+)
Ftrac_2987
O-succinylhomoserine sulfhydrylase (OSH sulfhydrylase) (OSHS sulfhydrylase)
Ftrac_2987
Single gene
DOOR ID:
2998650
Ftrac_2987
View Structure
4
3883094-3883190
(-)
TPP
3880742-3883034 (-)
Ftrac_3300
TonB-dependent receptor
Ftrac_3300
Single gene
DOOR ID:
2998760
Ftrac_3300
View Structure
5
3883260-3883354
(-)
TPP
3880742-3883034 (-)
Ftrac_3300
TonB-dependent receptor
Ftrac_3300
Single gene
DOOR ID:
2998760
Ftrac_3300
View Structure
6
3892449-3892544
(-)
TPP
3891342-3891849 (-)
Ftrac_3302
NAD metabolism ATPase/kinase-like protein
Ftrac_3302
Operon
DOOR ID:
775687
Ftrac_3302,
Ftrac_3303
View Structure
7
3992126-3992354
(-)
cobalamin
3990146-3992033 (-)
Ftrac_3390
TonB-dependent receptor
Ftrac_3390
Operon
DOOR ID:
775712
Ftrac_3387,
Ftrac_3388,
Ftrac_3389,
Ftrac_3390
View Structure
8
4296260-4296381
(-)
SAM
4292091-4296210 (-)
Ftrac_3625
Methionine synthase
Ftrac_3625
Operon
DOOR ID:
775772
Ftrac_3624,
Ftrac_3625
View Structure
Genome:
Marivirga tractuosa DSM 4126
(
NC_014759.1
);
Phylum:
Bacteroidetes/Chlorobi group
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