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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
506339-506434
(-)
TPP
505505-506282 (-)
Calni_0489
Thiazole synthase (0)
Calni_0489
Operon
DOOR ID:
774695
Calni_0488,
Calni_0489
View Structure
2
791524-791619
(-)
TPP
790168-791446 (-)
Calni_0757
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
Calni_0757
Operon
DOOR ID:
774751
Calni_0755,
Calni_0756,
Calni_0757
View Structure
3
1457456-1457560
(-)
SAM
1456264-1457395 (-)
Calni_1398
Homoserine O-acetyltransferase (HAT) (1) (Homoserine transacetylase) (HTA)
Calni_1398
Operon
DOOR ID:
774870
Calni_1394,
Calni_1395,
Calni_1396,
Calni_1397,
Calni_1398
View Structure
4
1947627-1947809
(+)
cobalamin
1947903-1949805 (+)
Calni_1879
TonB-dependent receptor plug
Calni_1879
Operon
DOOR ID:
774952
Calni_1879,
Calni_1880,
Calni_1881,
Calni_1882,
Calni_1883,
Calni_1884,
Calni_1885,
Calni_1886,
Calni_1887,
Calni_1888,
Calni_1889,
Calni_1890
View Structure
Genome:
Calditerrivibrio nitroreducens DSM 19672
(
NC_014758.1
);
Phylum:
Deferribacteres
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