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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
246979-247082
(-)
TPP
245720-246821 (-)
NLA_2520
Putative oxidoreductase
NLA_2520
Operon
DOOR ID:
1314425
NLA_2510
(thiE)
,
NLA_2520
View Structure
2
313963-314062
(+)
TPP
316485-317175 (-)
NLA_3440
NLA_3440
Operon
DOOR ID:
1314444
NLA_3440,
NLA_3450
(nlaB)
,
NLA_3460
View Structure
3
349911-349955
(-)
PreQ1
349433-349907 (-)
queF
NADPH-dependent 7-cyano-7-deazaguanine reductase (3) (7-cyano-7-carbaguanine reductase) (NADPH-dependent nitrile oxidoreductase) (PreQ(0) reductase)
NLA_3750
Single gene
DOOR ID:
2996432
NLA_3750
(queF)
View Structure
4
1654149-1654248
(-)
THF
1651614-1652421 (+)
comL
Outer membrane protein assembly factor BamD
NLA_15320
Single gene
DOOR ID:
2996945
NLA_15320
(comL)
View Structure
5
1777967-1778064
(-)
glycine
1776655-1777756 (-)
gcvT
Aminomethyltransferase (0) (Glycine cleavage system T protein)
NLA_16600
Single gene
DOOR ID:
2996985
NLA_16600
(gcvT)
View Structure
6
1837377-1837422
(-)
PreQ1
1836714-1837374 (-)
queC
7-cyano-7-deazaguanine synthase (0) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC)
NLA_17150
Operon
DOOR ID:
1314719
NLA_17130,
NLA_17140,
NLA_17150
(queC)
,
NLA_17160,
NLA_17170
View Structure
Genome:
Neisseria lactamica 020-06
(
NC_014752.1
);
Phylum:
Betaproteobacteria
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