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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
125505-125592
(-)
TPP
124122-125478 (-)
LDBND_0124
LDBND_0124
Operon
DOOR ID:
771916
LDBND_0123,
LDBND_0124
View Structure
2
140620-140795
(-)
lysine
138916-140500 (-)
LDBND_0141
LDBND_0141
Operon
DOOR ID:
771920
LDBND_0140,
LDBND_0141
View Structure
3
264156-264253
(-)
purine
263518-264088 (-)
LDBND_0255
LDBND_0255
Operon
DOOR ID:
771943
LDBND_0254,
LDBND_0255
View Structure
4
295911-296074
(+)
ykoK
296161-298852 (+)
LDBND_0289
LDBND_0289
Single gene
DOOR ID:
2990676
LDBND_0289
View Structure
5
467009-467105
(+)
TPP
467149-467719 (+)
LDBND_0456
LDBND_0456
Single gene
DOOR ID:
2990737
LDBND_0456
View Structure
6
781718-781833
(+)
FMN
781916-782621 (+)
LDBND_0770
LDBND_0770
Single gene
DOOR ID:
2990847
LDBND_0770
View Structure
7
1063914-1064090
(-)
lysine
1063084-1063798 (-)
LDBND_1031
LDBND_1031
Operon
DOOR ID:
772097
LDBND_1027,
LDBND_1028,
LDBND_1029
(dapA)
,
LDBND_1030,
LDBND_1031
View Structure
8
1545205-1545292
(-)
SMK_box
1542499-1543948 (-)
LDBND_1493
LDBND_1493
Operon
DOOR ID:
772192
LDBND_1493,
LDBND_1494
View Structure
Genome:
Lactobacillus delbrueckii subsp. bulgaricus ND02
(
NC_014727.1
);
Phylum:
Firmicutes
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