Genome: Caldicellulosiruptor kronotskyensis 2002 (NC_014720.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 328029-328225 (+)glmS328300-330136 (+)Calkro_0231

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
Calkro_0231Single gene

DOOR ID: 2987707
Calkro_0231 View Structure
2 415474-415698 (-)cobalamin412944-415218 (-)Calkro_0302

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)
Calkro_0302Single gene

DOOR ID: 2987732
Calkro_0302 View Structure
3 474403-474550 (+)ydaO-yuaA474686-475910 (+)Calkro_0356

Lysine 2;3-aminomutase YodO family protein
Calkro_0356Single gene

DOOR ID: 2987756
Calkro_0356 View Structure
4 543623-543773 (-)ydaO-yuaA542257-543616 (-)Calkro_0420

Pyruvate carboxyltransferase
Calkro_0420Single gene

DOOR ID: 2987777
Calkro_0420 View Structure
5 699201-699368 (+)ykoK699732-702420 (+)Calkro_0566

Magnesium-translocating P-type ATPase
Calkro_0566Single gene

DOOR ID: 2987804
Calkro_0566 View Structure
6 968311-968472 (+)ydaO-yuaA968476-969436 (+)Calkro_0823

NLP/P60 protein
Calkro_0823Single gene

DOOR ID: 2987861
Calkro_0823 View Structure
7 989712-989801 (+)c-di-GMP-I989950-991900 (+)Calkro_0845

Uncharacterized protein
Calkro_0845single gene

DOOR ID: 2987864
Calkro_0845 View Structure
8 996348-996437 (+)c-di-GMP-I996998-1002188 (+)Calkro_0850

Endoglucanase
Calkro_0850single gene

DOOR ID: 2987866
Calkro_0850 View Structure
9 1045800-1045897 (+)c-di-GMP-I1046037-1046457 (+)Calkro_0870

Uncharacterized protein
Calkro_0870single gene

DOOR ID: 2987878
Calkro_0870 View Structure
10 1728690-1728873 (+)lysine1728994-1729996 (+)Calkro_1562

Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (1) (Aspartate-beta-semialdehyde dehydrogenase)
Calkro_1562Operon

DOOR ID: 770074
Calkro_1562,
Calkro_1563,
Calkro_1564,
Calkro_1565
View Structure
11 1744691-1744811 (-)SAM1743301-1744579 (-)Calkro_1573

O-acetylhomoserine/O-acetylserine sulfhydrylase
Calkro_1573Operon

DOOR ID: 770076
Calkro_1570,
Calkro_1571,
Calkro_1572,
Calkro_1573
View Structure
12 1993842-1993974 (-)MOCO1992934-1993750 (-)Calkro_1829

Extracellular solute-binding protein family 1
Calkro_1829Operon

DOOR ID: 770120
Calkro_1823,
Calkro_1824,
Calkro_1825,
Calkro_1826,
Calkro_1827,
Calkro_1828,
Calkro_1829
View Structure
13 2128456-2128580 (-)SAM2127153-2128344 (-)Calkro_1946

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)
Calkro_1946Single gene

DOOR ID: 2988073
Calkro_1946 View Structure
14 2152418-2152574 (-)ykoK2150838-2152092 (-)Calkro_1970

MgtE intracellular region
Calkro_1970Operon

DOOR ID: 770153
Calkro_1969,
Calkro_1970
View Structure
15 2234824-2234887 (-)fluoride2234333-2234732 (-)Calkro_2040

Putative fluoride ion transporter CrcB
Calkro_2040Operon

DOOR ID: 770171
Calkro_2039,
Calkro_2040
View Structure
16 2260386-2260514 (+)FMN2260636-2261752 (+)Calkro_2068

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
Calkro_2068Operon

DOOR ID: 770177
Calkro_2068,
Calkro_2069,
Calkro_2070,
Calkro_2071
View Structure
17 2469742-2469876 (-)TPP2469418-2469694 (-)Calkro_2260

Thiamine biosynthesis protein ThiS
Calkro_2260Operon

DOOR ID: 770217
Calkro_2253,
Calkro_2254,
Calkro_2255,
Calkro_2256,
Calkro_2257,
Calkro_2258,
Calkro_2259,
Calkro_2260
View Structure