Genome: Rhodomicrobium vannielii ATCC 17100 (NC_014664.1); Phylum: Alphaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 39140-39228 (-)glycine37830-38982 (-)Rvan_0033

Glycine cleavage system T protein		Rvan_0033Operon

DOOR ID: 767564		Rvan_0030,
Rvan_0031,
Rvan_0032,
Rvan_0033		 View Structure
2 690297-690487 (-)cobalamin688146-690192 (-)Rvan_0611

TonB-dependent receptor		Rvan_0611Single gene

DOOR ID: 2982697		Rvan_0611 View Structure
3 1419867-1419944 (-)sam-alpha1418635-1419814 (-)Rvan_1280

Homoserine O-acetyltransferase (HAT) (1) (Homoserine transacetylase) (HTA)		Rvan_1280Operon

DOOR ID: 767800		Rvan_1279,
Rvan_1280		 View Structure
4 1668918-1669108 (+)cobalamin1669234-1669642 (+)Rvan_1531

Rvan_1531Operon

DOOR ID: 767842		Rvan_1531,
Rvan_1532,
Rvan_1533		 View Structure
5 2003116-2003310 (-)cobalamin2000704-2003017 (-)Rvan_1829

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)		Rvan_1829Single gene

DOOR ID: 2983271		Rvan_1829 View Structure
6 2007717-2007915 (+)cobalamin2008012-2010070 (+)Rvan_1834

Anaerobic ribonucleoside-triphosphate reductase		Rvan_1834Operon

DOOR ID: 767892		Rvan_1834,
Rvan_1835,
Rvan_1836		 View Structure
7 2012905-2013118 (+)cobalamin2013155-2013833 (+)Rvan_1839

Rvan_1839Single gene

DOOR ID: 2983274		Rvan_1839 View Structure
8 2340351-2340421 (-)SAH2338829-2339633 (+)Rvan_2142

Metallophosphoesterase		Rvan_2142Operon

DOOR ID: 767950		Rvan_2142,
Rvan_2143,
Rvan_2144,
Rvan_2145		 View Structure
9 2652054-2652167 (-)TPP2650125-2651982 (-)Rvan_2426

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		Rvan_2426Single gene

DOOR ID: 2983534		Rvan_2426 View Structure
10 2727992-2728190 (-)cobalamin2726905-2727862 (-)Rvan_2501

Transport system permease protein		Rvan_2501Operon

DOOR ID: 768020		Rvan_2499,
Rvan_2500,
Rvan_2501		 View Structure
11 2729212-2729409 (+)cobalamin2729547-2729892 (+)Rvan_2503

Cysteine-rich small domain protein		Rvan_2503Operon

DOOR ID: 768021		Rvan_2503,
Rvan_2504,
Rvan_2505		 View Structure
12 3700373-3700450 (-)sam-alpha3699138-3700332 (-)Rvan_3394

O-succinylhomoserine sulfhydrylase (OSH sulfhydrylase) (OSHS sulfhydrylase) 		Rvan_3394Single gene

DOOR ID: 2983905		Rvan_3394 View Structure