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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
591298-591412
(+)
SAM-IV
592873-593611 (+)
REQ_05610
REQ_05610
Single gene
DOOR ID:
2981002
REQ_05610
View Structure
2
647209-647342
(-)
cobalamin
646987-647182 (-)
REQ_06200
REQ_06200
Operon
DOOR ID:
766709
REQ_06190,
REQ_06200
View Structure
3
817628-817689
(-)
ykkC-III
817297-817612 (-)
REQ_07770
REQ_07770
single gene
DOOR ID:
2981063
REQ_07770
View Structure
4
844308-844493
(-)
cobalamin
843290-844235 (-)
REQ_08050
REQ_08050
Operon
DOOR ID:
766751
REQ_08010,
REQ_08020,
REQ_08030,
REQ_08040,
REQ_08050
View Structure
5
970970-971184
(-)
cobalamin
968560-970933 (-)
metE
REQ_09100
Single gene
DOOR ID:
2981116
REQ_09100
(metE)
View Structure
6
1010239-1010446
(-)
ydaO-yuaA
1009598-1010231 (-)
REQ_09520
REQ_09520
Single gene
DOOR ID:
2981131
REQ_09520
View Structure
7
1659695-1659791
(-)
TPP
1658972-1659617 (-)
REQ_15870
REQ_15870
Operon
DOOR ID:
766912
REQ_15840,
REQ_15850,
REQ_15860,
REQ_15870
View Structure
8
1976705-1976778
(+)
cobalamin
1976838-1978740 (+)
REQ_18730
REQ_18730
Operon
DOOR ID:
766978
REQ_18730,
REQ_18740
(cobO)
,
REQ_18750
(cobB)
,
REQ_18760,
REQ_18770
(cysG)
,
REQ_18780
View Structure
9
2606005-2606111
(-)
glycine
2602977-2605818 (-)
gcvP
REQ_24430
Single gene
DOOR ID:
2981646
REQ_24430
(gcvP)
View Structure
10
2997975-2998140
(-)
ydaO-yuaA
2997350-2997959 (-)
REQ_28180
REQ_28180
Single gene
DOOR ID:
2981773
REQ_28180
View Structure
11
3654721-3654836
(+)
SAM-IV
3654978-3656292 (+)
metC
REQ_34430
Operon
DOOR ID:
767289
REQ_34430
(metC)
,
REQ_34440
(metA)
View Structure
12
4146446-4146557
(-)
TPP
4145158-4145368 (-)
REQ_39040
REQ_39040
Operon
DOOR ID:
767390
REQ_39030
(thiG)
,
REQ_39040,
REQ_39050
View Structure
Genome:
Rhodococcus equi 103S
(
NC_014659.1
);
Phylum:
Actinobacteria
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