Genome: Caldicellulosiruptor owensensis OL (NC_014657.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 285726-285850 (+)TPP285994-286186 (+)Calow_0238

Thiamine biosynthesis protein ThiS
Calow_0238Operon

DOOR ID: 765957
Calow_0238,
Calow_0239,
Calow_0240,
Calow_0241,
Calow_0242,
Calow_0243,
Calow_0244,
Calow_0245
View Structure
2 494304-494432 (-)FMN493069-494185 (-)Calow_0428

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
Calow_0428Operon

DOOR ID: 765992
Calow_0425,
Calow_0426,
Calow_0427,
Calow_0428
View Structure
3 521273-521336 (+)fluoride521821-522178 (+)Calow_0456

Putative fluoride ion transporter CrcB
Calow_0456Operon

DOOR ID: 765997
Calow_0455,
Calow_0456
View Structure
4 612869-613027 (+)ykoK613151-613274 (+)Calow_0532

Calow_0532Operon

DOOR ID: 766016
Calow_0532,
Calow_0533,
Calow_0534
View Structure
5 630407-630531 (+)SAM630647-631838 (+)Calow_0547

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)
Calow_0547Single gene

DOOR ID: 2980195
Calow_0547 View Structure
6 772179-772312 (+)MOCO772404-773220 (+)Calow_0671

Extracellular solute-binding protein family 1
Calow_0671Operon

DOOR ID: 766046
Calow_0671,
Calow_0672,
Calow_0673,
Calow_0674,
Calow_0675,
Calow_0676,
Calow_0677
View Structure
7 1024498-1024623 (+)SAM1024735-1026013 (+)Calow_0939

O-acetylhomoserine/O-acetylserine sulfhydrylase (7)
Calow_0939Single gene

DOOR ID: 2980263
Calow_0939 View Structure
8 1038627-1038810 (-)lysine1037505-1038507 (-)Calow_0949

Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (1) (Aspartate-beta-semialdehyde dehydrogenase)
Calow_0949Operon

DOOR ID: 766093
Calow_0946,
Calow_0947,
Calow_0948,
Calow_0949
View Structure
9 1656217-1656306 (-)c-di-GMP-I1655665-1656085 (-)Calow_1587

Uncharacterized protein
Calow_1587single gene

DOOR ID: 2980380
Calow_1587 View Structure
10 1682288-1682450 (-)ydaO-yuaA1681323-1682283 (-)Calow_1608

NLP/P60 protein
Calow_1608Single gene

DOOR ID: 2980384
Calow_1608 View Structure
11 1710650-1710761 (-)glycine1708824-1709664 (-)Calow_1638

PHP domain protein
Calow_1638Operon

DOOR ID: 766220
Calow_1636,
Calow_1637,
Calow_1638
View Structure
12 2002793-2002945 (+)ydaO-yuaA2002951-2004310 (+)Calow_1908

Pyruvate carboxyltransferase
Calow_1908Single gene

DOOR ID: 2980457
Calow_1908 View Structure
13 2040963-2041037 (-)fluoride2040254-2040890 (-)Calow_1937

Calow_1937Operon

DOOR ID: 766282
Calow_1934,
Calow_1935,
Calow_1936,
Calow_1937
View Structure
14 2075907-2076056 (-)ydaO-yuaA2074549-2075773 (-)Calow_1972

Lysine 2;3-aminomutase YodO family protein
Calow_1972Single gene

DOOR ID: 2980473
Calow_1972 View Structure
15 2164454-2164622 (-)glmS2162544-2164380 (-)Calow_2052

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
Calow_2052Single gene

DOOR ID: 2980510
Calow_2052 View Structure
16 2285110-2285334 (+)cobalamin2285594-2287868 (+)Calow_2143

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4)
Calow_2143Single gene

DOOR ID: 2980548
Calow_2143 View Structure
17 2385460-2385548 (-)c-di-GMP-I2384411-2385395 (-)Calow_2219

Uncharacterized protein
Calow_2219single gene

DOOR ID: 2980579
Calow_2219 View Structure