Genome: Bacillus atrophaeus 1942 (NC_014639.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 90270-90369 (-)purine89055-90213 (-)BATR1942_00440

Hypoxanthine efflux transporter		BATR1942_00440Single gene

DOOR ID: 2970112		BATR1942_00440 View Structure
2 154389-154490 (+)purine154625-155948 (+)BATR1942_00710

Hypoxanthine/guanine permease		BATR1942_00710Single gene

DOOR ID: 2970129		BATR1942_00710 View Structure
3 158319-158420 (+)purine158553-159042 (+)BATR1942_00735

N5-carboxyaminoimidazole ribonucleotide mutase (N5-CAIR mutase) (8) (5-(carboxyamino)imidazole ribonucleotide mutase)		BATR1942_00735Operon

DOOR ID: 760404		BATR1942_00735,
BATR1942_00740,
BATR1942_00745,
BATR1942_00750,
BATR1942_00755,
BATR1942_00760,
BATR1942_00765,
BATR1942_00770,
BATR1942_00775,
BATR1942_00780 (purN),
BATR1942_00785 (purH),
BATR1942_00790		 View Structure
4 416103-416212 (+)TPP416352-418125 (+)BATR1942_01990

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		BATR1942_01990Single gene

DOOR ID: 2970231		BATR1942_01990 View Structure
5 649860-649982 (-)SAM647930-649769 (-)BATR1942_03140

Bifunctional homocysteine S-methyltransferase/5;10-methylenetetrahydrofolate reductase protein (0)		BATR1942_03140Single gene

DOOR ID: 2970354		BATR1942_03140 View Structure
6 707646-707754 (+)TPP707837-708545 (+)BATR1942_03470

Aminopyrimidine aminohydrolase 		BATR1942_03470Operon

DOOR ID: 760504		BATR1942_03470,
BATR1942_03475,
BATR1942_03480,
BATR1942_03485,
BATR1942_03490 (thiG),
BATR1942_03495,
BATR1942_03500		 View Structure
7 725383-725507 (+)SAM725576-726698 (+)BATR1942_03605

Cystathionine gamma-synthase		BATR1942_03605Operon

DOOR ID: 760508		BATR1942_03605,
BATR1942_03610		 View Structure
8 831001-831116 (+)ykkC-yxkD831198-831537 (+)BATR1942_04235

Efflux transporter		BATR1942_04235Operon

DOOR ID: 760533		BATR1942_04235,
BATR1942_04240		 View Structure
9 845067-845222 (-)SAM842647-844936 (-)BATR1942_04310

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)		BATR1942_04310Single gene

DOOR ID: 2970438		BATR1942_04310 View Structure
10 851139-851250 (-)TPP850426-851041 (-)BATR1942_04340

Thiamine binding protein		BATR1942_04340Operon

DOOR ID: 760536		BATR1942_04325,
BATR1942_04330,
BATR1942_04335,
BATR1942_04340		 View Structure
11 855026-855194 (+)ykoK855290-855410 (+)BATR1942_04370

BATR1942_04370Operon

DOOR ID: 760538		BATR1942_04370,
BATR1942_04375		 View Structure
12 870516-870619 (+)yybP-ykoY870726-871521 (+)BATR1942_04460

Putative transporter		BATR1942_04460Single gene

DOOR ID: 2970455		BATR1942_04460 View Structure
13 884934-885088 (-)SAM883631-884825 (-)mtnK

Methylthioribose kinase (MTR kinase) (00)		BATR1942_04535Operon

DOOR ID: 760543		BATR1942_04530 (mtnA),
BATR1942_04535 (mtnK)		 View Structure
14 887291-887390 (+)SAM887474-888692 (+)mtnW

2;3-diketo-5-methylthiopentyl-1-phosphate enolase (DK-MTP-1-P enolase) (RuBisCO-like protein) (RLP)		BATR1942_04550Operon

DOOR ID: 760544		BATR1942_04550 (mtnW),
BATR1942_04555 (mtnX),
BATR1942_04560,
BATR1942_04565		 View Structure
15 900902-900946 (+)PreQ1901070-901730 (+)BATR1942_04620

7-cyano-7-deazaguanine synthase (0) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC)		BATR1942_04620Operon

DOOR ID: 760546		BATR1942_04620,
BATR1942_04625,
BATR1942_04630,
BATR1942_04635		 View Structure
16 1065716-1065821 (+)TPP1065914-1067192 (+)BATR1942_05470

Acetylornithine deacetylase (6)		BATR1942_05470Operon

DOOR ID: 760576		BATR1942_05470,
BATR1942_05475		 View Structure
17 1088525-1088630 (+)SAM1088860-1089562 (+)BATR1942_05580

Phosphoadenosine phosphosulfate reductase (3'-phosphoadenylylsulfate reductase) (PAPS reductase; thioredoxin dependent) (PAPS sulfotransferase) (PAdoPS reductase)		BATR1942_05580Operon

DOOR ID: 760580		BATR1942_05580,
BATR1942_05585,
BATR1942_05590 (sat),
BATR1942_05595		 View Structure
18 1656750-1656841 (-)SAM1655626-1656628 (-)BATR1942_08160

Putative 2-hydroxyacid dehydrogenase		BATR1942_08160Operon

DOOR ID: 760668		BATR1942_08155,
BATR1942_08160		 View Structure
19 1779409-1779508 (-)purine1778734-1779319 (-)BATR1942_08890

Xanthine phosphoribosyltransferase (XPRTase) (2)		BATR1942_08890Operon

DOOR ID: 760696		BATR1942_08885,
BATR1942_08890		 View Structure
20 1871643-1871778 (-)FMN1870911-1871490 (-)BATR1942_09405

Riboflavin transporter		BATR1942_09405Operon

DOOR ID: 760720		BATR1942_09405,
BATR1942_09410		 View Structure
21 1892529-1892674 (-)FMN1891303-1892395 (-)BATR1942_09520

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		BATR1942_09520Operon

DOOR ID: 760725		BATR1942_09505 (ribH),
BATR1942_09510,
BATR1942_09515,
BATR1942_09520,
BATR1942_09525,
BATR1942_09530		 View Structure
22 2070304-2070404 (-)glycine2069023-2070118 (-)gcvT

Aminomethyltransferase (0) (Glycine cleavage system T protein)		BATR1942_10600Operon

DOOR ID: 760775		BATR1942_10590,
BATR1942_10595,
BATR1942_10600 (gcvT)		 View Structure
23 2337972-2338151 (-)lysine2336616-2337846 (-)BATR1942_12000

Aspartokinase 		BATR1942_12000Single gene

DOOR ID: 2970995		BATR1942_12000 View Structure
24 2558815-2558953 (-)SAM2557440-2558643 (-)BATR1942_13060

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		BATR1942_13060Single gene

DOOR ID: 2971090		BATR1942_13060 View Structure
25 2608353-2608454 (+)TPP2608552-2609131 (+)BATR1942_13305

Thiamin permease		BATR1942_13305Single gene

DOOR ID: 2971106		BATR1942_13305 View Structure
26 2619018-2619166 (+)ydaO-yuaA2619246-2619915 (+)BATR1942_13360

Potassium uptake protein		BATR1942_13360Operon

DOOR ID: 760893		BATR1942_13360,
BATR1942_13365		 View Structure
27 2801404-2801510 (-)SAM2800270-2801296 (-)BATR1942_14295

Methionine import ATP-binding protein MetN 		BATR1942_14295Operon

DOOR ID: 760923		BATR1942_14285,
BATR1942_14290,
BATR1942_14295		 View Structure
28 2839698-2839837 (-)cobalamin2838642-2839596 (-)BATR1942_14510

Putative lipoprotein		BATR1942_14510Operon

DOOR ID: 760932		BATR1942_14495,
BATR1942_14500,
BATR1942_14505,
BATR1942_14510		 View Structure
29 2856535-2856715 (-)lysine2855023-2856427 (-)BATR1942_14600

Lysine permease		BATR1942_14600Single gene

DOOR ID: 2971215		BATR1942_14600 View Structure
30 3392820-3392922 (-)ykkC-yxkD3391913-3392750 (-)BATR1942_17385

Efflux transporter		BATR1942_17385Single gene

DOOR ID: 2971445		BATR1942_17385 View Structure
31 3408410-3408496 (+)SAM3408571-3409711 (+)BATR1942_17495

Putative methyltetrahydrofolate methyltransferase		BATR1942_17495Single gene

DOOR ID: 2971462		BATR1942_17495 View Structure
32 3416639-3416740 (+)purine3416868-3418062 (+)BATR1942_17530

Nucleoside permease		BATR1942_17530Single gene

DOOR ID: 2971465		BATR1942_17530 View Structure
33 3524975-3525055 (-)glycine3523471-3524824 (-)BATR1942_18050

YdgF		BATR1942_18050Single gene

DOOR ID: 2971518		BATR1942_18050 View Structure
34 3817723-3817894 (+)glmS3817981-3819784 (+)BATR1942_19545

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		BATR1942_19545Single gene

DOOR ID: 2971615		BATR1942_19545 View Structure
35 4122818-4122963 (+)ydaO-yuaA4123127-4124948 (+)BATR1942_20890

Putative metabolite transporter		BATR1942_20890Single gene

DOOR ID: 2971727		BATR1942_20890 View Structure