RiboswitchDB

Genome: Burkholderia sp. CCGE1003 chromosome II (NC_014540.1); Phylum: Betaproteobacteria

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

238315-238505 (+)

cobalamin

238551-240132 (+)

BC1003_3739

Precorrin-3B synthase

Operon

DOOR ID: 750493

BC1003_3739,
BC1003_3740,
BC1003_3741,
BC1003_3742

2

1026147-1026285 (-)

cobalamin

1025883-1026105 (-)

BC1003_4412

Operon

DOOR ID: 750621

BC1003_4411,
BC1003_4412

3

2651365-2651606 (-)

cobalamin

2650342-2651107 (-)

BC1003_5842

Uroporphyrin-III C-methyltransferase

Operon

DOOR ID: 750879

BC1003_5838,
BC1003_5839,
BC1003_5840,
BC1003_5841,
BC1003_5842

4

2651676-2651957 (+)

cobalamin

2652123-2653215 (+)

BC1003_5843

Cobalamin biosynthesis protein CobW

Operon

DOOR ID: 750880

BC1003_5843,
BC1003_5844,
BC1003_5845

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";}}