RiboswitchDB

Genome: Maribacter sp. HTCC2170 (NC_014472.1); Phylum: Bacteroidetes/Chlorobi group

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

228537-228642 (-)

SAM

227443-228436 (-)

FB2170_17141

5-methyltetrahydrofolate--homocysteine methyltransferase

Operon

DOOR ID: 741714

FB2170_17126,
FB2170_17131,
FB2170_17136,
FB2170_17141,
FB2170_17146,
FB2170_17151,
FB2170_17156,
FB2170_17161

2

242184-242308 (-)

SAM

240768-242061 (-)

FB2170_17201

O-acetyl-L-homoserine sulfhydrylase

Operon

DOOR ID: 741716

FB2170_17191,
FB2170_17196,
FB2170_17201

3

1969058-1969150 (+)

TPP

1969234-1971406 (+)

FB2170_07564

Single gene

DOOR ID: 2930080

FB2170_07564

4

3343805-3344030 (-)

cobalamin

3341862-3343734 (-)

FB2170_13783

TonB-dependent receptor; putative

Single gene

DOOR ID: 2930485

FB2170_13783

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";}i:4;a:19:{i:0;i:4;i:1;s:11:"NC_014472.1";i:2;s:24:"Maribacter sp. HTCC2170 ";i:3;s:28:"Bacteroidetes/Chlorobi group";i:4;s:5:"68336";i:5;s:15:"3343805-3344030";i:6;s:1:"-";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:15:"3341862-3343734";i:10;s:1:"-";i:11;s:12:"FB2170_13783";i:12;s:33:"TonB-dependent receptor; putative";i:13;s:12:"FB2170_13783";i:14;s:11:"Single gene";i:15;s:7:"2930485";i:16;s:12:"FB2170_13783";i:17;s:0:"";i:18;s:15:"View Structure
";}}