Genome: Thermoanaerobacterium thermosaccharolyticum DSM 571 (NC_014410.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 21560-21673 (+)FMN21754-22825 (+)Tthe_0020

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		Tthe_0020Operon

DOOR ID: 1312919		Tthe_0023,
Tthe_0022,
Tthe_0021,
Tthe_0020		 View Structure
2 58116-58176 (+)fluoride58233-58635 (+)Tthe_0054

Putative fluoride ion transporter CrcB		Tthe_0054Operon

DOOR ID: 1312926		Tthe_0055,
Tthe_0054		 View Structure
3 226257-226355 (+)TPP226416-227055 (+)Tthe_0230

Proton-coupled thiamine transporter YuaJ		Tthe_0230Single gene

DOOR ID: 2926950		Tthe_0230 View Structure
4 321187-321312 (+)ydaO-yuaA321423-322524 (+)Tthe_0328

NAD/NADP octopine/nopaline dehydrogenase		Tthe_0328Operon

DOOR ID: 1312977		Tthe_0329,
Tthe_0328		 View Structure
5 479837-479991 (+)glmS480027-481854 (+)Tthe_0494

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		Tthe_0494Single gene

DOOR ID: 2927020		Tthe_0494 View Structure
6 611302-611493 (-)lysine609847-611185 (-)Tthe_0610

Diaminopimelate decarboxylase (DAP decarboxylase) (DAPDC) (0)		Tthe_0610Single gene

DOOR ID: 2927060		Tthe_0610 View Structure
7 725381-725498 (+)ydaO-yuaA725504-726185 (+)Tthe_0706

NLP/P60 protein		Tthe_0706Single gene

DOOR ID: 2927084		Tthe_0706 View Structure
8 733012-733120 (-)SAM732030-732948 (-)Tthe_0712

Homoserine O-acetyltransferase (HAT) (1) (Homoserine transacetylase) (HTA)		Tthe_0712Single gene

DOOR ID: 2927088		Tthe_0712 View Structure
9 736735-736798 (+)fluoride736882-738418 (+)Tthe_0718

DNA mismatch repair protein MutS domain protein		Tthe_0718Operon

DOOR ID: 1313051		Tthe_0719,
Tthe_0718		 View Structure
10 744938-745040 (+)SAM745170-746463 (+)Tthe_0724

O-acetylhomoserine/O-acetylserine sulfhydrylase (7)		Tthe_0724Single gene

DOOR ID: 2927093		Tthe_0724 View Structure
11 866247-866341 (+)SAM866399-867302 (+)Tthe_0848

Methylenetetrahydrofolate reductase (0)		Tthe_0848Operon

DOOR ID: 1313082		Tthe_0849,
Tthe_0848		 View Structure
12 897294-897422 (+)ydaO-yuaA897579-898938 (+)Tthe_0887

Potassium uptake protein; TrkH family (4)		Tthe_0887Operon

DOOR ID: 1313093		Tthe_0888,
Tthe_0887		 View Structure
13 986844-986943 (+)TPP987056-988358 (+)Tthe_0971

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		Tthe_0971Single gene

DOOR ID: 2927145		Tthe_0971 View Structure
14 1135196-1135327 (+)ydaO-yuaA1135332-1136031 (+)Tthe_1107

NLP/P60 protein		Tthe_1107Single gene

DOOR ID: 2927202		Tthe_1107 View Structure
15 1298918-1298999 (+)c-di-GMP-II1299028-1300723 (+)Tthe_1277

Type II secretion system protein E		Tthe_1277Operon

DOOR ID: 1313169		Tthe_1280,
Tthe_1279,
Tthe_1278,
Tthe_1277		 View Structure
16 1619774-1619901 (-)ydaO-yuaA1618955-1619774 (-)Tthe_1625

Cell wall hydrolase SleB		Tthe_1625Single gene

DOOR ID: 2927289		Tthe_1625 View Structure
17 1834210-1834422 (-)cobalamin1833342-1834086 (-)Tthe_1837

Cobalt transport protein CbiM (Energy-coupling factor transporter probable substrate-capture protein CbiM) (ECF transporter S component CbiM)		Tthe_1837Operon

DOOR ID: 1313269		Tthe_1834,
Tthe_1835,
Tthe_1836,
Tthe_1837		 View Structure
18 1866371-1866487 (-)TPP1865494-1866304 (-)Tthe_1876

Phosphomethylpyrimidine kinase		Tthe_1876Operon

DOOR ID: 1313274		Tthe_1873,
Tthe_1874,
Tthe_1875,
Tthe_1876		 View Structure
19 1941616-1941716 (+)glycine1941861-1942965 (+)Tthe_1950

Aminomethyltransferase (0) (Glycine cleavage system T protein)		Tthe_1950Operon

DOOR ID: 1313290		Tthe_1950,
Tthe_1951,
Tthe_1952,
Tthe_1953		 View Structure
20 2051080-2051126 (-)PreQ12050467-2050956 (-)Tthe_2058

Tthe_2058Operon

DOOR ID: 1313314		Tthe_2057,
Tthe_2058		 View Structure
21 2093980-2094082 (+)SAM2094164-2095187 (+)Tthe_2098

Methionine import ATP-binding protein MetN 		Tthe_2098Operon

DOOR ID: 1313324		Tthe_2098,
Tthe_2099,
Tthe_2100		 View Structure
22 2114228-2114325 (-)purine2112684-2114139 (-)Tthe_2116

Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPD) (IMPDH) (05)		Tthe_2116Operon

DOOR ID: 1313328		Tthe_2115,
Tthe_2116		 View Structure
23 2153293-2153419 (-)FMN2152646-2153231 (-)Tthe_2159

Riboflavin transporter		Tthe_2159Single gene

DOOR ID: 2927431		Tthe_2159 View Structure
24 2200498-2200600 (-)SAM2199234-2200422 (-)Tthe_2203

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		Tthe_2203Single gene

DOOR ID: 2927445		Tthe_2203 View Structure
25 2268167-2268339 (-)cobalamin2267039-2267990 (-)Tthe_2266

Periplasmic binding protein		Tthe_2266Operon

DOOR ID: 1313357		Tthe_2256,
Tthe_2257,
Tthe_2258,
Tthe_2259,
Tthe_2260,
Tthe_2261,
Tthe_2262,
Tthe_2263,
Tthe_2264,
Tthe_2265,
Tthe_2266		 View Structure
26 2615336-2615418 (-)c-di-GMP-II2613870-2615067 (-)Tthe_2590

Transposase IS4 family protein		Tthe_2590Single gene

DOOR ID: 2927552		Tthe_2590 View Structure
27 2755468-2755630 (-)ykoK2754049-2755300 (-)Tthe_2724

MgtE intracellular region		Tthe_2724Operon

DOOR ID: 1313459		Tthe_2723,
Tthe_2724		 View Structure