Genome: Micromonospora aurantiaca ATCC 27029 (NC_014391.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 116853-116987 (+)ydaO-yuaA117000-118032 (+)Micau_0113

NLP/P60 protein
Micau_0113Single gene

DOOR ID: 2920938
Micau_0113 View Structure
2 366810-366903 (+)cobalamin367010-367943 (+)Micau_0365

Periplasmic binding protein
Micau_0365Operon

DOOR ID: 1187286
Micau_0367,
Micau_0366,
Micau_0365
View Structure
3 576591-576722 (-)ydaO-yuaA575558-576587 (-)Micau_0571

Micau_0571Single gene

DOOR ID: 2921120
Micau_0571 View Structure
4 1561349-1561414 (-)ykkC-III1560974-1561289 (-)Micau_1500

Micau_1500operon

DOOR ID: 1187544
Micau_1499,
Micau_1500
View Structure
5 2198105-2198247 (+)ydaO-yuaA2198450-2199293 (+)Micau_2078

Micau_2078Single gene

DOOR ID: 2921683
Micau_2078 View Structure
6 2503446-2503618 (+)FMN2503788-2504850 (+)Micau_2356

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
Micau_2356Operon

DOOR ID: 1187735
Micau_2356,
Micau_2357,
Micau_2358,
Micau_2359,
Micau_2360,
Micau_2361,
Micau_2362,
Micau_2363,
Micau_2364
View Structure
7 2994191-2994406 (-)cobalamin2991679-2994076 (-)Micau_2626

Ribonucleoside-diphosphate reductase
Micau_2626Operon

DOOR ID: 1187793
Micau_2625,
Micau_2626
View Structure
8 2996734-2996942 (-)cobalamin2996090-2996603 (-)Micau_2629

Thioesterase superfamily protein
Micau_2629Operon

DOOR ID: 1187794
Micau_2628,
Micau_2629
View Structure
9 3611578-3611659 (+)ZMP-ZTP3611672-3612539 (+)Micau_3201

Bifunctional protein FolD [Includes: Methenyltetrahydrofolate cyclohydrolase ]
Micau_3201Single gene

DOOR ID: 2922076
Micau_3201 View Structure
10 3621229-3621319 (-)glycine3618332-3621155 (-)Micau_3209

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))
Micau_3209Single gene

DOOR ID: 2922082
Micau_3209 View Structure
11 3765926-3766097 (-)ydaO-yuaA3764629-3765079 (-)Micau_3352

Micau_3352Single gene

DOOR ID: 2922138
Micau_3352 View Structure
12 3888752-3888841 (+)ZMP-ZTP3888859-3890296 (+)Micau_3465

Serine hydroxymethyltransferase (SHMT) (Serine methylase)
Micau_3465Single gene

DOOR ID: 2922184
Micau_3465 View Structure
13 4027504-4027614 (+)SAM-IV4027647-4027773 (+)Micau_3602

Micau_3602Operon

DOOR ID: 1187992
Micau_3602,
Micau_3603,
Micau_3604,
Micau_3605
View Structure
14 4462343-4462416 (-)cobalamin4460729-4462184 (-)Micau_3933

Cell wall anchor domain-containing protein
Micau_3933Operon

DOOR ID: 1188065
Micau_3929,
Micau_3930,
Micau_3931,
Micau_3932,
Micau_3933
View Structure
15 4464191-4464327 (-)cobalamin4463051-4464095 (-)Micau_3935

LPXTG-motif cell wall anchor domain protein
Micau_3935Operon

DOOR ID: 1188066
Micau_3934,
Micau_3935
View Structure
16 5340142-5340272 (+)ydaO-yuaA5340276-5341350 (+)Micau_4724

Micau_4724Single gene

DOOR ID: 2922568
Micau_4724 View Structure
17 5448104-5448210 (+)TPP5448285-5448876 (+)Micau_4831

ABC-type thiamin-related transport system; permease component 1; predicted
Micau_4831Single gene

DOOR ID: 2922605
Micau_4831 View Structure
18 6158019-6158130 (-)TPP6156274-6157345 (-)Micau_5487

Glycine oxidase ThiO
Micau_5487Operon

DOOR ID: 1188394
Micau_5482,
Micau_5483,
Micau_5484,
Micau_5485,
Micau_5486,
Micau_5487,
Micau_5488
View Structure
19 6405021-6405143 (+)SAM-IV6405188-6406451 (+)Micau_5740

Aminotransferase class V
Micau_5740Single gene

DOOR ID: 2922953
Micau_5740 View Structure
20 6425287-6425419 (-)SAM6423984-6425274 (-)Micau_5756

Threonine synthase
Micau_5756Single gene

DOOR ID: 2922961
Micau_5756 View Structure