Genome: Acetohalobium arabaticum DSM 5501 (NC_014378.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 21766-21848 (-)c-di-GMP-II21162-21705 (-)Acear_0015

Acear_0015Single gene

DOOR ID: 2919238		Acear_0015 View Structure
2 42949-43050 (+)purine43160-44633 (+)Acear_0041

Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPD) (IMPDH) (05)		Acear_0041Single gene

DOOR ID: 2919244		Acear_0041 View Structure
3 239557-239640 (+)c-di-GMP-I239759-240899 (+)Acear_0228

Histidine kinase		Acear_0228operon

DOOR ID: 736773		Acear_0228,
Acear_0229		 View Structure
4 423434-423585 (+)ydaO-yuaA423680-425024 (+)Acear_0391

Potassium uptake protein; TrkH family (4)		Acear_0391Operon

DOOR ID: 736805		Acear_0391,
Acear_0392,
Acear_0393,
Acear_0394,
Acear_0395,
Acear_0396		 View Structure
5 827512-827762 (+)cobalamin827851-829132 (+)Acear_0757

Hydroxymethylpyrimidine synthase		Acear_0757Operon

DOOR ID: 736890		Acear_0757,
Acear_0758,
Acear_0759,
Acear_0760,
Acear_0761,
Acear_0762		 View Structure
6 837226-837421 (+)cobalamin837591-838347 (+)Acear_0766

Cobalt transport protein CbiM (Energy-coupling factor transporter probable substrate-capture protein CbiM) (ECF transporter S component CbiM)		Acear_0766Operon

DOOR ID: 736892		Acear_0766,
Acear_0767,
Acear_0768,
Acear_0769,
Acear_0770,
Acear_0771,
Acear_0772,
Acear_0773,
Acear_0774,
Acear_0775		 View Structure
7 846488-846684 (+)cobalamin846862-847645 (+)Acear_0776

Nickel transport complex; NikM subunit; transmembrane		Acear_0776Single gene

DOOR ID: 2919393		Acear_0776 View Structure
8 850676-850871 (+)cobalamin851437-852538 (+)Acear_0781

Periplasmic binding protein		Acear_0781Operon

DOOR ID: 736894		Acear_0781,
Acear_0782,
Acear_0783,
Acear_0784,
Acear_0785		 View Structure
9 863427-863607 (+)cobalamin863755-864553 (+)Acear_0794

Cobalt ABC transporter; inner membrane subunit CbiQ		Acear_0794Operon

DOOR ID: 736897		Acear_0794,
Acear_0795		 View Structure
10 900030-900226 (+)cobalamin900352-900970 (+)Acear_0830

Precorrin-8X methylmutase 		Acear_0830Operon

DOOR ID: 736905		Acear_0830,
Acear_0831,
Acear_0832,
Acear_0833,
Acear_0834,
Acear_0835,
Acear_0836,
Acear_0837,
Acear_0838,
Acear_0839,
Acear_0840,
Acear_0841,
Acear_0842,
Acear_0843,
Acear_0844,
Acear_0845,
Acear_0846,
Acear_0847,
Acear_0848		 View Structure
11 948436-948502 (-)fluoride947166-948375 (-)Acear_0875

Sodium/proton antiporter; CPA1 family (TC 2.A.36)		Acear_0875Single gene

DOOR ID: 2919419		Acear_0875 View Structure
12 1059708-1059817 (+)MOCO1059858-1061814 (+)Acear_0979

GAF modulated sigma54 specific transcriptional regulator; Fis family		Acear_0979Single gene

DOOR ID: 2919458		Acear_0979 View Structure
13 1229536-1229651 (+)SAM1229743-1230940 (+)Acear_1146

O-acetylhomoserine sulfhydrolase (9)		Acear_1146Operon

DOOR ID: 736960		Acear_1146,
Acear_1147		 View Structure
14 1260895-1261077 (-)lysine1259251-1260832 (-)Acear_1175

Transporter; NhaC family (TC 2.A.35)		Acear_1175Single gene

DOOR ID: 2919523		Acear_1175 View Structure
15 1266175-1266281 (-)TPP1265543-1266092 (-)Acear_1184

Proton-coupled thiamine transporter YuaJ		Acear_1184Operon

DOOR ID: 736968		Acear_1183,
Acear_1184		 View Structure
16 1324245-1324395 (-)FMN1323738-1324179 (+)Acear_1243

Acear_1243Single gene

DOOR ID: 2919550		Acear_1243 View Structure
17 1461046-1461214 (-)ydaO-yuaA1459085-1460939 (-)Acear_1374

Multi-sensor signal transduction histidine kinase		Acear_1374Operon

DOOR ID: 737008		Acear_1369,
Acear_1370,
Acear_1371,
Acear_1372,
Acear_1373,
Acear_1374		 View Structure
18 1530591-1530742 (-)FMN1529092-1530208 (-)Acear_1431

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		Acear_1431Operon

DOOR ID: 737019		Acear_1428,
Acear_1429,
Acear_1430,
Acear_1431		 View Structure
19 1544752-1544836 (-)SAM1543494-1544682 (-)Acear_1444

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		Acear_1444Single gene

DOOR ID: 2919620		Acear_1444 View Structure
20 1585655-1585843 (-)cobalamin1585275-1585569 (-)Acear_1488

Acear_1488Operon

DOOR ID: 737028		Acear_1486,
Acear_1487,
Acear_1488		 View Structure
21 1669886-1669986 (+)TPP1670064-1670265 (+)Acear_1570

Thiamine biosynthesis protein ThiS		Acear_1570Operon

DOOR ID: 737049		Acear_1570,
Acear_1571,
Acear_1572,
Acear_1573		 View Structure
22 1680781-1680959 (-)lysine1679887-1680685 (-)Acear_1580

4-hydroxy-tetrahydrodipicolinate reductase (HTPA reductase) 		Acear_1580Operon

DOOR ID: 737051		Acear_1578,
Acear_1579,
Acear_1580		 View Structure
23 1744745-1744836 (-)c-di-GMP-I1744106-1744514 (-)Acear_1649

Flagellar basal body rod protein FlgB		Acear_1649operon

DOOR ID: 737059		Acear_1641,
Acear_1642,
Acear_1643,
Acear_1644,
Acear_1645,
Acear_1646,
Acear_1647,
Acear_1648,
Acear_1649		 View Structure
24 2115252-2115455 (-)cobalamin2114138-2115173 (-)Acear_2009

Alcohol dehydrogenase GroES domain protein		Acear_2009Single gene

DOOR ID: 2919742		Acear_2009 View Structure
25 2116623-2116739 (-)SAM2115716-2116529 (-)Acear_2011

Lipoprotein		Acear_2011Single gene

DOOR ID: 2919743		Acear_2011 View Structure
26 2143061-2143167 (-)TPP2142181-2142973 (-)Acear_2048

Phosphomethylpyrimidine kinase 		Acear_2048Operon

DOOR ID: 737148		Acear_2045,
Acear_2046,
Acear_2047,
Acear_2048		 View Structure
27 2165588-2165710 (-)SAM2164456-2165506 (-)Acear_2067

Methionine import ATP-binding protein MetN 		Acear_2067Operon

DOOR ID: 737153		Acear_2065,
Acear_2066,
Acear_2067		 View Structure
28 2173281-2173401 (-)MOCO2173031-2173217 (-)Acear_2075

Acear_2075Operon

DOOR ID: 737154		Acear_2070,
Acear_2071,
Acear_2072,
Acear_2073,
Acear_2074,
Acear_2075		 View Structure
29 2176589-2176690 (-)purine2174943-2176494 (-)Acear_2077

GMP synthase [glutamine-hydrolyzing] (GMP synthetase) (Glutamine amidotransferase)		Acear_2077Operon

DOOR ID: 737155		Acear_2076,
Acear_2077		 View Structure
30 2208982-2209141 (-)glmS2207125-2208958 (-)Acear_2105

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		Acear_2105Single gene

DOOR ID: 2919760		Acear_2105 View Structure
31 2378911-2379013 (-)yybP-ykoY2377724-2378732 (-)Acear_2265

Sodium/calcium exchanger membrane region		Acear_2265Single gene

DOOR ID: 2919793		Acear_2265 View Structure
32 2441053-2441135 (-)ykkC-yxkD2439701-2440973 (-)Acear_2322

Phosphoribosylamine--glycine ligase (3) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase)		Acear_2322Operon

DOOR ID: 737204		Acear_2310,
Acear_2311,
Acear_2312,
Acear_2313,
Acear_2314,
Acear_2315,
Acear_2316,
Acear_2317,
Acear_2318,
Acear_2319,
Acear_2320,
Acear_2321,
Acear_2322		 View Structure
33 2441119-2441220 (-)purine2439701-2440973 (-)Acear_2322

Phosphoribosylamine--glycine ligase (3) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase)		Acear_2322Operon

DOOR ID: 737204		Acear_2310,
Acear_2311,
Acear_2312,
Acear_2313,
Acear_2314,
Acear_2315,
Acear_2316,
Acear_2317,
Acear_2318,
Acear_2319,
Acear_2320,
Acear_2321,
Acear_2322		 View Structure