Genome: Desulfarculus baarsii DSM 2075 (NC_014365.1); Phylum: delta/epsilon subdivisions
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 226774-226882 (+)TPP226972-227887 (+)Deba_0205

Phosphomethylpyrimidine kinase
Deba_0205Operon

DOOR ID: 732423
Deba_0205,
Deba_0206,
Deba_0207,
Deba_0208
View Structure
2 426420-426608 (+)cobalamin427126-427651 (-)Deba_0378

Deba_0378Operon

DOOR ID: 732461
Deba_0378,
Deba_0379
View Structure
3 869231-869423 (-)cobalamin867066-869049 (-)Deba_0771

TonB-dependent receptor plug
Deba_0771Single gene

DOOR ID: 2912412
Deba_0771 View Structure
4 2198622-2198730 (+)TPP2198824-2199607 (+)Deba_1981

Thiamine thiazole synthase
Deba_1981Single gene

DOOR ID: 2912760
Deba_1981 View Structure
5 2254577-2254760 (+)cobalamin2254871-2256182 (+)Deba_2032

Thiamine biosynthesis protein ThiC
Deba_2032Single gene

DOOR ID: 2912781
Deba_2032 View Structure
6 2546372-2546592 (-)cobalamin2545449-2546226 (-)Deba_2297

Deba_2297Operon

DOOR ID: 732880
Deba_2292,
Deba_2293,
Deba_2294,
Deba_2295,
Deba_2296,
Deba_2297
View Structure
7 2673639-2673840 (-)cobalamin2673213-2673528 (-)Deba_2423

Deba_2423Single gene

DOOR ID: 2912879
Deba_2423 View Structure
8 2686476-2686608 (+)cobalamin2686753-2687680 (+)Deba_2438

Periplasmic binding protein
Deba_2438Operon

DOOR ID: 732916
Deba_2438,
Deba_2439
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9 2708872-2709060 (+)cobalamin2709153-2710536 (+)Deba_2456

Cobyrinate a;c-diamide synthase (1) (Cobyrinic acid a;c-diamide synthetase)
Deba_2456Operon

DOOR ID: 732922
Deba_2456,
Deba_2457,
Deba_2458,
Deba_2459,
Deba_2460,
Deba_2461,
Deba_2462,
Deba_2463,
Deba_2464
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10 2717790-2717976 (+)cobalamin2718090-2718939 (+)Deba_2465

ABC transporter related protein
Deba_2465Operon

DOOR ID: 732923
Deba_2465,
Deba_2466
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11 2734557-2734749 (-)cobalamin2732400-2734380 (-)Deba_2476

TonB-dependent receptor
Deba_2476Single gene

DOOR ID: 2912889
Deba_2476 View Structure
12 2806214-2806412 (-)cobalamin2804597-2806097 (-)Deba_2521

Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Deba_2521Operon

DOOR ID: 732932
Deba_2516,
Deba_2517,
Deba_2518,
Deba_2519,
Deba_2520,
Deba_2521
View Structure
13 2807777-2807982 (+)cobalamin2808179-2810303 (+)Deba_2524

TonB-dependent receptor
Deba_2524Operon

DOOR ID: 732933
Deba_2524,
Deba_2525,
Deba_2526,
Deba_2527,
Deba_2528
View Structure
14 3196244-3196309 (-)SAH3195155-3195920 (+)Deba_2886

Alpha/beta hydrolase fold protein
Deba_2886Single gene

DOOR ID: 2913004
Deba_2886 View Structure
15 3203341-3203430 (-)c-di-GMP-I3202814-3203270 (-)Deba_2895

Putative inhibitor of MCP methylation
Deba_2895single gene

DOOR ID: 2913011
Deba_2895 View Structure