Genome: Bacillus cereus biovar anthracis str. CI (NC_014335.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 162833-162988 (+)glmS163179-164982 (+)glmS

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		BACI_c01990Operon

DOOR ID: 1186246		BACI_c01990 (glmS),
BACI_c01980		 View Structure
2 182815-182929 (-)SAM181916-182729 (-)BACI_c02130

Lipoprotein		BACI_c02130Operon

DOOR ID: 1186248		BACI_c02130,
BACI_c02120,
BACI_c02110		 View Structure
3 191241-191346 (+)SAM191482-192400 (+)oppB1

Oligopeptide ABC transporter; permease		BACI_c02240Operon

DOOR ID: 1186250		BACI_c02280 (oppA1),
BACI_c02270 (oppF1),
BACI_c02260 (oppD1),
BACI_c02250 (oppC1),
BACI_c02240 (oppB1)		 View Structure
4 202741-202847 (-)SAM200967-202608 (-)oppA3

Oligopeptide ABC transporter; oligopeptide-binding protein		BACI_c02340Single gene

DOOR ID: 2906723		BACI_c02340 (oppA3) View Structure
5 273137-273238 (+)purine273402-274941 (+)guaA2

GMP synthase [glutamine-hydrolyzing] (GMP synthetase) (Glutamine amidotransferase)		BACI_c03180Single gene

DOOR ID: 2906755		BACI_c03180 (guaA2) View Structure
6 275096-275197 (+)purine275324-276650 (+)BACI_c03200

Guanine-hypoxanthine permease xanthine/uracil permease family protein 		BACI_c03200Single gene

DOOR ID: 2906756		BACI_c03200 View Structure
7 291878-291979 (+)purine292089-292575 (+)purE

N5-carboxyaminoimidazole ribonucleotide mutase (N5-CAIR mutase) (8) (5-(carboxyamino)imidazole ribonucleotide mutase)		BACI_c03320Operon

DOOR ID: 1186265		BACI_c03420 (purH),
BACI_c03410 (purN),
BACI_c03400 (purM),
BACI_c03390 (purF),
BACI_c03380 (purL),
BACI_c03370 (purQ),
BACI_c03360 (purS),
BACI_c03350 (purC),
BACI_c03340 (purB),
BACI_c03330 (purK),
BACI_c03320 (purE)		 View Structure
8 317300-317406 (+)SAM317529-318549 (+)BACI_c03570

Methionine import ATP-binding protein MetN 		BACI_c03570Operon

DOOR ID: 1186268		BACI_c03590,
BACI_c03580,
BACI_c03570		 View Structure
9 338983-339084 (-)purine337583-338780 (-)nupC1

Nucleoside transporter		BACI_c03780Single gene

DOOR ID: 2906774		BACI_c03780 (nupC1) View Structure
10 369139-369251 (-)SAM368420-369053 (-)BACI_c04080

Possible cyclase		BACI_c04080Single gene

DOOR ID: 2906789		BACI_c04080 View Structure
11 390421-390530 (+)TPP390602-391409 (+)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)		BACI_c04270Operon

DOOR ID: 1186280		BACI_c04270 (thiM),
BACI_c04280 (thiE1)		 View Structure
12 393798-393882 (+)c-di-GMP-I394023-395763 (+)cheW1

Methyl-accepting chemotaxis protein		BACI_c04300single gene

DOOR ID: 2906802		BACI_c04300 (cheW1) View Structure
13 395825-395926 (+)TPP396026-396347 (+)BACI_c04320

BACI_c04320Operon

DOOR ID: 1186281		BACI_c04320,
BACI_c04330,
BACI_c04340,
BACI_c04350		 View Structure
14 717425-717537 (+)TPP717785-718481 (+)tenA1

Aminopyrimidine aminohydrolase 		BACI_c07560Operon

DOOR ID: 1186329		BACI_c07560 (tenA1),
BACI_c07570,
BACI_c07580,
BACI_c07590,
BACI_c07600 (thiE2),
BACI_c07610 (goxB),
BACI_c07620 (thiS),
BACI_c07630 (thiG),
BACI_c07640 (thiF),
BACI_c07650 (thiD1)		 View Structure
15 717598-717701 (+)TPP717785-718481 (+)tenA1

Aminopyrimidine aminohydrolase 		BACI_c07560Operon

DOOR ID: 1186329		BACI_c07560 (tenA1),
BACI_c07570,
BACI_c07580,
BACI_c07590,
BACI_c07600 (thiE2),
BACI_c07610 (goxB),
BACI_c07620 (thiS),
BACI_c07630 (thiG),
BACI_c07640 (thiF),
BACI_c07650 (thiD1)		 View Structure
16 725598-725745 (+)ydaO-yuaA725838-726225 (+)BACI_c07670

BACI_c07670Single gene

DOOR ID: 2906940		BACI_c07670 View Structure
17 726734-726879 (+)ydaO-yuaA727179-728847 (+)kdpA

Potassium-transporting ATPase potassium-binding subunit (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) (Potassium-translocating ATPase A chain)		BACI_c07690Operon

DOOR ID: 1186330		BACI_c07690 (kdpA),
BACI_c07700 (kdpB),
BACI_c07710 (kdpC),
BACI_c07720 (kdpD)		 View Structure
18 840221-840403 (-)lysine838648-840073 (-)arcD2

Arginine/ornithine antiporter		BACI_c08930Operon

DOOR ID: 1186359		BACI_c08920,
BACI_c08930 (arcD2)		 View Structure
19 1264174-1264338 (-)yybP-ykoY1263287-1264151 (-)BACI_c13420

Possible integral membrane protein; TerC family		BACI_c13420Single gene

DOOR ID: 2907217		BACI_c13420 View Structure
20 1293953-1293996 (+)PreQ11294089-1294752 (+)BACI_c13770

7-cyano-7-deazaguanine synthase (0) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC)		BACI_c13770Operon

DOOR ID: 1186446		BACI_c13770,
BACI_c13780 (ygcM),
BACI_c13790,
BACI_c13800 (folE1)		 View Structure
21 1357637-1357818 (+)lysine1357998-1359315 (+)lysA

Diaminopimelate decarboxylase (DAP decarboxylase) (DAPDC) (0)		BACI_c14590Single gene

DOOR ID: 2907273		BACI_c14590 (lysA) View Structure
22 1359432-1359540 (+)SAM1359612-1359756 (+)BACI_c14610

BACI_c14610Single gene

DOOR ID: 2907274		BACI_c14610 View Structure
23 1372186-1372291 (+)SAM1372386-1373703 (+)nhaC2

Na+/H+ antiporter		BACI_c14760Single gene

DOOR ID: 2907277		BACI_c14760 (nhaC2) View Structure
24 1419603-1419742 (+)FMN1419904-1420483 (+)ypaA

Riboflavin transporter		BACI_c15260Single gene

DOOR ID: 2907307		BACI_c15260 (ypaA) View Structure
25 1494230-1494331 (+)purine1494438-1495032 (+)xpt

Xanthine phosphoribosyltransferase (XPRTase) (2)		BACI_c16110Operon

DOOR ID: 1186483		BACI_c16110 (xpt),
BACI_c16120 (pbuX)		 View Structure
26 1506942-1507105 (+)ykoK1507450-1508176 (+)BACI_c16260

Mg(2+) P-type ATPase-like protein 		BACI_c16260Single gene

DOOR ID: 2907343		BACI_c16260 View Structure
27 1539092-1539136 (+)PreQ11539142-1539628 (+)BACI_c16460

Hypothetical membrane spanning protein		BACI_c16460Single gene

DOOR ID: 2907352		BACI_c16460 View Structure
28 1679610-1679796 (-)lysine1678180-1679410 (-)dapG1

Aspartokinase 		BACI_c18030Single gene

DOOR ID: 2907417		BACI_c18030 (dapG1) View Structure
29 1750006-1750152 (+)ydaO-yuaA1750294-1752121 (+)BACI_c18730

Amino acid permease		BACI_c18730Single gene

DOOR ID: 2907458		BACI_c18730 View Structure
30 1769740-1769845 (+)SAM1769964-1771182 (+)BACI_c18910

Multidrug resistance protein possible tetracycline resistance determinant		BACI_c18910Single gene

DOOR ID: 2907469		BACI_c18910 View Structure
31 2196819-2196938 (-)glycine2195343-2196711 (-)BACI_c23260

Na(+)-linked D-alanine glycine permease		BACI_c23260Single gene

DOOR ID: 2907682		BACI_c23260 View Structure
32 2447335-2447440 (+)TPP2447563-2448253 (+)tenA2

Aminopyrimidine aminohydrolase 		BACI_c25910Single gene

DOOR ID: 2907832		BACI_c25910 (tenA2) View Structure
33 2472260-2472375 (+)SAM2472514-2473063 (+)BACI_c26150

BACI_c26150Operon

DOOR ID: 1186647		BACI_c26150,
BACI_c26160,
BACI_c26170 (cbiQ)		 View Structure
34 2839566-2839758 (+)lysine2839870-2841337 (+)lysP

Lysine specific permease		BACI_c30250Single gene

DOOR ID: 2908036		BACI_c30250 (lysP) View Structure
35 2972425-2972526 (-)SAM2971130-2972336 (-)BACI_c31550

Peptidase M20 domain-containing protein 2		BACI_c31550Single gene

DOOR ID: 2908103		BACI_c31550 View Structure
36 3072133-3072231 (-)SAM3071774-3072089 (-)BACI_c32570

BACI_c32570Single gene

DOOR ID: 2908161		BACI_c32570 View Structure
37 3117131-3117272 (+)ydaO-yuaA3117568-3118324 (-)BACI_c33100

Conserved hypothetical Methyltransferase		BACI_c33100Operon

DOOR ID: 1186772		BACI_c33100,
BACI_c33110		 View Structure
38 3556048-3556149 (-)purine3555088-3555829 (-)BACI_c37430

Transcriptional regulator; GntR family		BACI_c37430Single gene

DOOR ID: 2908400		BACI_c37430 View Structure
39 3766046-3766234 (+)cobalamin3766361-3768650 (+)metE1

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)		BACI_c39610Single gene

DOOR ID: 2908476		BACI_c39610 (metE1) View Structure
40 3799237-3799378 (-)SAM3797964-3799146 (-)mtnK

Methylthioribose kinase (MTR kinase) (00)		BACI_c40000Operon

DOOR ID: 1186911		BACI_c39990,
BACI_c40000 (mtnK)		 View Structure
41 3801571-3801678 (+)SAM3801742-3802987 (+)BACI_c40050

2;3-diketo-5-methylthiopentyl-1-phosphate enolase (DK-MTP-1-P enolase) (RuBisCO-like protein) (RLP)		BACI_c40050Operon

DOOR ID: 1186912		BACI_c40050,
BACI_c40060,
BACI_c40070,
BACI_c40080		 View Structure
42 3864142-3864285 (+)FMN3864596-3865097 (+)ribD

Riboflavin biosynthesis protein contains N-terminal domain of RibD (6)		BACI_c40800Operon

DOOR ID: 1186923		BACI_c40800 (ribD),
BACI_c40810 (ribD'),
BACI_c40820 (ribE),
BACI_c40830 (ribA),
BACI_c40840 (ribH)		 View Structure
43 3984122-3984231 (-)SAM3982218-3984051 (-)metE2

Bifunctional homocysteine S-methyltransferase/5;10-methylenetetrahydrofolate reductase protein (3)		BACI_c42200Operon

DOOR ID: 1186948		BACI_c42160,
BACI_c42170 (murG2),
BACI_c42180,
BACI_c42190,
BACI_c42200 (metE2)		 View Structure
44 3984434-3984543 (+)SAM3984637-3984976 (+)BACI_c42230

Cystathionine beta-lyase N-terminal part		BACI_c42230Single gene

DOOR ID: 2908583		BACI_c42230 View Structure
45 4490030-4490151 (-)SAM4488660-4489860 (-)metK

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		BACI_c47650Single gene

DOOR ID: 2908806		BACI_c47650 (metK) View Structure
46 4528129-4528230 (+)TPP4528316-4528985 (+)BACI_c48100

BACI_c48100Single gene

DOOR ID: 2908833		BACI_c48100 View Structure
47 4693374-4693481 (-)SAM4692170-4693196 (-)BACI_c49930

Methionine import ATP-binding protein MetN 		BACI_c49930Operon

DOOR ID: 1187108		BACI_c49900,
BACI_c49910,
BACI_c49920,
BACI_c49930		 View Structure
48 4778741-4778800 (+)fluoride4778824-4779259 (+)ccrB1

Putative fluoride ion transporter CrcB		BACI_c50860Operon

DOOR ID: 1187130		BACI_c50860 (ccrB1),
BACI_c50870 (ccrB2)		 View Structure
49 4903186-4903301 (-)TPP4901312-4903073 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		BACI_c52120Single gene

DOOR ID: 2908985		BACI_c52120 (thiC) View Structure
50 4904917-4905032 (-)TPP4904672-4904912 (-)BACI_c52160

BACI_c52160Single gene

DOOR ID: 2908988		BACI_c52160 View Structure
51 5096532-5096637 (-)SAM5095141-5096440 (-)cysD

O-acetylhomoserine sulfhydrylase (9)		BACI_c54010Operon

DOOR ID: 1187199		BACI_c54000 (metA),
BACI_c54010 (cysD)		 View Structure