Genome: Lactobacillus casei str. Zhang (NC_014334.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 98777-98956 (-)lysine97331-98678 (-)LCAZH_0108

LCAZH_0108Operon

DOOR ID: 729588
LCAZH_0106,
LCAZH_0107,
LCAZH_0108
View Structure
2 339265-339354 (+)TPP339510-340077 (+)LCAZH_0342

LCAZH_0342Operon

DOOR ID: 729636
LCAZH_0342,
LCAZH_0343,
LCAZH_0344
View Structure
3 801072-801160 (+)SMK_box802455-803949 (+)LCAZH_0821

LCAZH_0821Single gene

DOOR ID: 2905869
LCAZH_0821 View Structure
4 1255373-1255536 (+)ykoK1255753-1256569 (+)LCAZH_1298

LCAZH_1298Single gene

DOOR ID: 2906043
LCAZH_1298 View Structure
5 1326350-1326468 (+)FMN1326564-1327143 (+)LCAZH_1360

LCAZH_1360Single gene

DOOR ID: 2906065
LCAZH_1360 View Structure
6 1708556-1708653 (-)TPP1707907-1708513 (-)LCAZH_1748

LCAZH_1748Single gene

DOOR ID: 2906170
LCAZH_1748 View Structure
7 1794578-1794753 (-)lysine1794436-1794565 (+)LCAZH_1834

LCAZH_1834Single gene

DOOR ID: 2906214
LCAZH_1834 View Structure
8 1975588-1975686 (-)preQ1-II1974957-1975077 (-)LCAZH_2015

LCAZH_2015Operon

DOOR ID: 729976
LCAZH_2015,
LCAZH_2016
View Structure
9 2188668-2188762 (-)THF2188112-2188631 (-)LCAZH_2222

LCAZH_2222Single gene

DOOR ID: 2906396
LCAZH_2222 View Structure
10 2362768-2362822 (-)fluoride2362203-2362614 (-)LCAZH_2408

LCAZH_2408Operon

DOOR ID: 730058
LCAZH_2407,
LCAZH_2408
View Structure
11 2363544-2363608 (+)fluoride2363667-2364954 (+)LCAZH_2410

LCAZH_2410Operon

DOOR ID: 730059
LCAZH_2410,
LCAZH_2411
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12 2786532-2786704 (+)lysine2786807-2788415 (+)LCAZH_2850

LCAZH_2850Operon

DOOR ID: 730147
LCAZH_2850,
LCAZH_2851
View Structure