Genome: Amycolatopsis mediterranei U32 (NC_014318.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 1944249-1944361 (+)glycine1944465-1947255 (+)gcvP

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))		AMED_1813Operon

DOOR ID: 724670		AMED_1813 (gcvP),
AMED_1814 (gcvT),
AMED_1815 (gcvH),
AMED_1816 (glyA),
AMED_1817 (lipA),
AMED_1818 (sdaA)		 View Structure
2 3173710-3173824 (+)SAM-IV3173863-3175207 (+)AMED_2968

Cysteine desulfurase		AMED_2968Single gene

DOOR ID: 2897331		AMED_2968 View Structure
3 5512691-5512789 (-)glycine5509493-5512379 (-)gcvP

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))		AMED_4983Operon

DOOR ID: 725319		AMED_4981,
AMED_4982 (galE),
AMED_4983 (gcvP)		 View Structure
4 5739561-5739639 (-)SAH5735916-5739546 (-)metH

Methionine synthase (3) (5-methyltetrahydrofolate--homocysteine methyltransferase)		AMED_5176Single gene

DOOR ID: 2898144		AMED_5176 (metH) View Structure
5 5838993-5839071 (+)SAH5839155-5840616 (+)ahcY

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)		AMED_5263Operon

DOOR ID: 725380		AMED_5263 (ahcY),
AMED_5264		 View Structure
6 7363301-7363439 (-)ykkC-yxkD7362399-7363296 (-)AMED_6684

AMED_6684Operon

DOOR ID: 725681		AMED_6683,
AMED_6684		 View Structure
7 7365216-7365349 (+)SAM7365362-7366628 (+)thrC

Threonine synthase		AMED_6687Single gene

DOOR ID: 2898702		AMED_6687 (thrC) View Structure
8 7810060-7810173 (+)cobalamin7810222-7813786 (+)cobN

Cobaltochelatase CobN		AMED_7069Single gene

DOOR ID: 2898851		AMED_7069 (cobN) View Structure
9 8848981-8849088 (-)TPP8847910-8848945 (-)tbpA

Periplasmic substrate-binding component of ABC-type thiamine transport system		AMED_8042Operon

DOOR ID: 725961		AMED_8040,
AMED_8041,
AMED_8042 (tbpA)		 View Structure
10 9072521-9072611 (-)SAM9071299-9072313 (-)AMED_8247

Methionine import ATP-binding protein MetN 		AMED_8247Operon

DOOR ID: 726002		AMED_8243,
AMED_8244,
AMED_8245,
AMED_8246 (ispE),
AMED_8247		 View Structure
11 9409729-9409850 (+)TPP9409870-9411481 (+)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		AMED_8571Operon

DOOR ID: 726073		AMED_8571 (thiC),
AMED_8572		 View Structure
12 9416924-9417029 (-)TPP9415656-9415857 (-)thiS

Thiamine biosynthesis protein ThiS		AMED_8577Operon

DOOR ID: 726074		AMED_8576 (thiG),
AMED_8577 (thiS),
AMED_8578 (thiO)		 View Structure
13 9513711-9513800 (+)SAH9515585-9516113 (+)AMED_8671

AMED_8671Operon

DOOR ID: 726092		AMED_8669 (otsA),
AMED_8670 (otsB),
AMED_8671,
AMED_8672,
AMED_8673		 View Structure