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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
271672-271768
(-)
TPP
269738-271613 (-)
Nwat_0260
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
Nwat_0260
Single gene
DOOR ID:
2895276
Nwat_0260
View Structure
2
1891884-1892094
(-)
cobalamin
1889808-1891749 (-)
Nwat_1724
TonB-dependent receptor plug
Nwat_1724
Single gene
DOOR ID:
2895803
Nwat_1724
View Structure
3
3036607-3036682
(-)
c-di-GMP-I
3035731-3036442 (-)
Nwat_2848
Nucleotidyl transferase
Nwat_2848
operon
DOOR ID:
724201
Nwat_2845,
Nwat_2846,
Nwat_2847,
Nwat_2848
View Structure
4
3042683-3042769
(-)
c-di-GMP-I
3040268-3042554 (-)
Nwat_2853
Carbohydrate-binding and sugar hydrolysis
Nwat_2853
operon
DOOR ID:
724203
Nwat_2852,
Nwat_2853
View Structure
Genome:
Nitrosococcus watsonii C-113
(
NC_014315.1
);
Phylum:
Gammaproteobacteria
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