RiboswitchDB

Genome: Croceibacter atlanticus HTCC2559 (NC_014230.1); Phylum: Bacteroidetes/Chlorobi group

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

385099-385197 (-)

TPP

382520-384932 (-)

CA2559_01505

Putative TonB-dependent transmembrane receptor protein

Single gene

DOOR ID: 2878330

CA2559_01505

2

1343804-1343926 (+)

SAM

1344044-1345361 (+)

CA2559_05980

O-acetylhomoserine sulfhydrylase

Single gene

DOOR ID: 2878584

CA2559_05980

3

2713446-2713649 (-)

cobalamin

2711549-2713388 (-)

CA2559_12508

Putative TonB-dependent outer membrane receptor

Operon

DOOR ID: 716280

CA2559_12503,
CA2559_12508

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