Genome: Thermoanaerobacter mathranii subsp. mathranii str. A3 (NC_014209.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 44910-45024 (+)FMN45109-46192 (+)Tmath_0038

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		Tmath_0038Operon

DOOR ID: 707800		Tmath_0038,
Tmath_0039,
Tmath_0040,
Tmath_0041		 View Structure
2 101325-101384 (+)fluoride101442-101844 (+)Tmath_0103

Putative fluoride ion transporter CrcB		Tmath_0103Operon

DOOR ID: 707812		Tmath_0103,
Tmath_0104		 View Structure
3 363496-363601 (-)glycine362241-363348 (-)Tmath_0335

Aminomethyltransferase (0) (Glycine cleavage system T protein)		Tmath_0335Operon

DOOR ID: 707864		Tmath_0332,
Tmath_0333,
Tmath_0334,
Tmath_0335		 View Structure
4 445321-445514 (+)cobalamin445628-446576 (+)Tmath_0409

Periplasmic binding protein		Tmath_0409Operon

DOOR ID: 707876		Tmath_0409,
Tmath_0410,
Tmath_0411,
Tmath_0412,
Tmath_0413,
Tmath_0414,
Tmath_0415,
Tmath_0416,
Tmath_0417,
Tmath_0418,
Tmath_0419,
Tmath_0420,
Tmath_0421,
Tmath_0422,
Tmath_0423,
Tmath_0424,
Tmath_0425,
Tmath_0426,
Tmath_0427,
Tmath_0428,
Tmath_0429,
Tmath_0430,
Tmath_0431,
Tmath_0432,
Tmath_0433,
Tmath_0434		 View Structure
5 470480-470731 (+)cobalamin470853-471597 (+)Tmath_0438

Cobalt transport protein CbiM (Energy-coupling factor transporter probable substrate-capture protein CbiM) (ECF transporter S component CbiM)		Tmath_0438Operon

DOOR ID: 707878		Tmath_0438,
Tmath_0439,
Tmath_0440,
Tmath_0441		 View Structure
6 587241-587345 (+)SAM587405-588593 (+)Tmath_0555

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		Tmath_0555Single gene

DOOR ID: 2863605		Tmath_0555 View Structure
7 628757-628875 (+)FMN628966-629551 (+)Tmath_0597

Riboflavin transporter		Tmath_0597Single gene

DOOR ID: 2863619		Tmath_0597 View Structure
8 654265-654366 (+)purine654501-655956 (+)Tmath_0626

Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPD) (IMPDH) (05)		Tmath_0626Operon

DOOR ID: 707914		Tmath_0626,
Tmath_0627		 View Structure
9 657595-657696 (+)purine657887-659270 (+)Tmath_0628

Xanthine/uracil/vitamin C permease		Tmath_0628Operon

DOOR ID: 707915		Tmath_0628,
Tmath_0629,
Tmath_0630,
Tmath_0631,
Tmath_0632,
Tmath_0633,
Tmath_0634,
Tmath_0635,
Tmath_0636,
Tmath_0637,
Tmath_0638		 View Structure
10 657681-657781 (+)ykkC-yxkD657887-659270 (+)Tmath_0628

Xanthine/uracil/vitamin C permease		Tmath_0628Operon

DOOR ID: 707915		Tmath_0628,
Tmath_0629,
Tmath_0630,
Tmath_0631,
Tmath_0632,
Tmath_0633,
Tmath_0634,
Tmath_0635,
Tmath_0636,
Tmath_0637,
Tmath_0638		 View Structure
11 703525-703627 (+)TPP703683-704478 (+)Tmath_0670

Phosphomethylpyrimidine kinase		Tmath_0670Operon

DOOR ID: 707923		Tmath_0670,
Tmath_0671,
Tmath_0672,
Tmath_0673		 View Structure
12 851894-851981 (+)c-di-GMP-I852042-853383 (+)Tmath_0808

Sigma 54 interacting domain protein		Tmath_0808single gene

DOOR ID: 2863677		Tmath_0808 View Structure
13 896809-896941 (+)ydaO-yuaA896946-897867 (+)Tmath_0856

NLP/P60 protein		Tmath_0856Single gene

DOOR ID: 2863694		Tmath_0856 View Structure
14 936523-936654 (+)ydaO-yuaA936755-937856 (+)Tmath_0903

NAD/NADP octopine/nopaline dehydrogenase		Tmath_0903Operon

DOOR ID: 707969		Tmath_0903,
Tmath_0904		 View Structure
15 1058119-1058244 (+)ydaO-yuaA1058244-1059045 (+)Tmath_1032

Cell wall hydrolase SleB		Tmath_1032Single gene

DOOR ID: 2863739		Tmath_1032 View Structure
16 1134808-1134888 (+)c-di-GMP-II1134914-1136591 (+)Tmath_1111

Type II secretion system protein E		Tmath_1111Operon

DOOR ID: 708008		Tmath_1111,
Tmath_1112,
Tmath_1113,
Tmath_1114		 View Structure
17 1368587-1368709 (+)SAM1368779-1369814 (+)Tmath_1375

Methionine import ATP-binding protein MetN 		Tmath_1375Operon

DOOR ID: 708049		Tmath_1375,
Tmath_1376,
Tmath_1377,
Tmath_1378		 View Structure
18 1580032-1580136 (-)SAM1579056-1579968 (-)Tmath_1592

Methylenetetrahydrofolate reductase (0)		Tmath_1592Operon

DOOR ID: 708094		Tmath_1590,
Tmath_1591,
Tmath_1592		 View Structure
19 1664277-1664336 (-)fluoride1663566-1664223 (-)Tmath_1677

Tmath_1677Single gene

DOOR ID: 2863872		Tmath_1677 View Structure
20 1742927-1742963 (-)PreQ11741628-1741856 (-)Tmath_1735

Tmath_1735Single gene

DOOR ID: 2863890		Tmath_1735 View Structure
21 1771715-1771904 (+)lysine1772027-1773365 (+)Tmath_1763

Diaminopimelate decarboxylase (DAP decarboxylase) (DAPDC) (0)		Tmath_1763Single gene

DOOR ID: 2863894		Tmath_1763 View Structure
22 1831795-1831906 (-)SAM1830437-1831727 (-)Tmath_1812

Homoserine dehydrogenase 		Tmath_1812Operon

DOOR ID: 708135		Tmath_1810,
Tmath_1811,
Tmath_1812		 View Structure
23 1839377-1839465 (+)c-di-GMP-I1839585-1840035 (+)Tmath_1817

Uncharacterized protein		Tmath_1817single gene

DOOR ID: 2863911		Tmath_1817 View Structure
24 1843441-1843548 (+)TPP1843595-1844894 (+)Tmath_1820

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		Tmath_1820Single gene

DOOR ID: 2863912		Tmath_1820 View Structure
25 1894022-1894178 (-)glmS1892163-1893990 (-)Tmath_1867

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		Tmath_1867Single gene

DOOR ID: 2863931		Tmath_1867 View Structure
26 2041185-2041271 (+)c-di-GMP-I2041609-2043988 (+)Tmath_2027

Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)		Tmath_2027single gene

DOOR ID: 2863970		Tmath_2027 View Structure
27 2120584-2120749 (-)ykoK2117525-2120213 (-)Tmath_2103

Magnesium-translocating P-type ATPase 		Tmath_2103Single gene

DOOR ID: 2863997		Tmath_2103 View Structure
28 2122294-2122396 (-)TPP2121593-2122232 (-)Tmath_2105

Proton-coupled thiamine transporter YuaJ		Tmath_2105Single gene

DOOR ID: 2863999		Tmath_2105 View Structure