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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
214171-214453
(-)
cobalamin
212138-214013 (-)
M301_0175
TonB-dependent receptor
M301_0175
Single gene
DOOR ID:
2862695
M301_0175
View Structure
2
239595-239676
(+)
SAH
239769-241194 (+)
M301_0204
Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
M301_0204
Operon
DOOR ID:
707233
M301_0204,
M301_0205,
M301_0206
View Structure
3
1179317-1179564
(-)
cobalamin
1176301-1179118 (-)
M301_1051
Ribonucleoside-diphosphate reductase
M301_1051
Single gene
DOOR ID:
2862958
M301_1051
View Structure
4
2310139-2310182
(+)
mini-ykkC
2310200-2310521 (+)
M301_2080
M301_2080
Single gene
DOOR ID:
2863239
M301_2080
View Structure
5
2461359-2461464
(-)
ykkC-yxkD
2460303-2461305 (-)
M301_2225
NMT1/THI5 like domain protein
M301_2225
Single gene
DOOR ID:
2863287
M301_2225
View Structure
6
2547134-2547237
(+)
c-di-GMP-I
2547267-2548563 (+)
M301_2310
Uncharacterized protein
M301_2310
single gene
DOOR ID:
2863308
M301_2310
View Structure
7
2994958-2995063
(+)
TPP
2995126-2997022 (+)
M301_2739
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
M301_2739
Single gene
DOOR ID:
2863446
M301_2739
View Structure
Genome:
Methylotenera versatilis 301
(
NC_014207.1
);
Phylum:
Betaproteobacteria
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