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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
438995-439109
(+)
FMN
439235-440336 (+)
BLJ_0362
Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
BLJ_0362
Operon
DOOR ID:
704898
BLJ_0362,
BLJ_0363,
BLJ_0364,
BLJ_0365
(ribH)
View Structure
2
478050-478206
(-)
ykoK
475988-477779 (-)
BLJ_0396
Binding-protein-dependent transport systems inner membrane component
BLJ_0396
Operon
DOOR ID:
704904
BLJ_0395,
BLJ_0396
View Structure
3
749111-749180
(-)
fluoride
748511-749048 (-)
BLJ_0602
Putative fluoride ion transporter CrcB
BLJ_0602
Operon
DOOR ID:
704943
BLJ_0601,
BLJ_0602
View Structure
4
779985-780089
(+)
TPP
780151-780793 (+)
BLJ_0629
BLJ_0629
Operon
DOOR ID:
704947
BLJ_0629,
BLJ_0630,
BLJ_0631
View Structure
5
797838-797941
(+)
TPP
798114-798309 (+)
BLJ_0644
Thiamine biosynthesis protein ThiS
BLJ_0644
Operon
DOOR ID:
704951
BLJ_0644,
BLJ_0645
(thiG)
,
BLJ_0646,
BLJ_0647
View Structure
6
1596422-1596530
(+)
TPP
1597547-1600301 (+)
BLJ_1351
Multifunctional fusion protein [Includes: Phosphomethylpyrimidine synthase (Thiamine-phosphate pyrophosphorylase) (TMP pyrophosphorylase) (TMP-PPase)]
BLJ_1351
Single gene
DOOR ID:
2857541
BLJ_1351
View Structure
7
1694513-1694664
(+)
FMN
1694670-1695324 (+)
BLJ_1431
BLJ_1431
Single gene
DOOR ID:
2857576
BLJ_1431
View Structure
Genome:
Bifidobacterium longum subsp. longum JDM301
(
NC_014169.1
);
Phylum:
Actinobacteria
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