RiboswitchDB

Genome: Segniliparus rotundus DSM 44985 (NC_014168.1); Phylum: Actinobacteria

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

663885-663960 (-)

SAH

660409-663400 (-)

Srot_0677

Operon

DOOR ID: 704298

Srot_0676,
Srot_0677,
Srot_0678,
Srot_0679

2

840069-840150 (-)

fluoride

839600-840050 (-)

Srot_0849

Putative fluoride ion transporter CrcB

Operon

DOOR ID: 704337

Srot_0848,
Srot_0849

3

1221155-1221263 (-)

TPP

1219022-1219319 (+)

Srot_1249

Single gene

DOOR ID: 2856412

Srot_1249

4

1906610-1906727 (+)

SAM-IV

1906841-1908146 (+)

Srot_1887

O-acetylhomoserine/O-acetylserine sulfhydrylase (9)

Operon

DOOR ID: 704574

Srot_1887,
Srot_1888

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