Genome: Tsukamurella paurometabola DSM 20162 (NC_014158.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 574482-574593 (+)SAM-IV574658-575948 (+)Tpau_0546

Cysteine desulfurase
Tpau_0546Operon

DOOR ID: 701627
Tpau_0546,
Tpau_0547,
Tpau_0548
View Structure
2 969773-969893 (-)SAM-IV968609-969764 (-)Tpau_0944

Homoserine O-acetyltransferase (HAT) (1) (Homoserine transacetylase) (HTA)
Tpau_0944Single gene

DOOR ID: 2852462
Tpau_0944 View Structure
3 1675366-1675488 (-)cobalamin1674359-1675325 (-)Tpau_1600

Periplasmic binding protein
Tpau_1600Operon

DOOR ID: 701865
Tpau_1598,
Tpau_1599,
Tpau_1600
View Structure
4 1993238-1993321 (-)ZMP-ZTP1992335-1993223 (-)Tpau_1907

Bifunctional protein FolD [Includes: Methenyltetrahydrofolate cyclohydrolase ]
Tpau_1907Operon

DOOR ID: 701935
Tpau_1906,
Tpau_1907
View Structure
5 2239030-2239104 (-)SAH2235283-2239015 (-)Tpau_2144

Methionine synthase (3) (5-methyltetrahydrofolate--homocysteine methyltransferase)
Tpau_2144Operon

DOOR ID: 701995
Tpau_2143,
Tpau_2144
View Structure
6 2413037-2413163 (+)cobalamin2413197-2414238 (+)Tpau_2321

Transport system permease protein
Tpau_2321Operon

DOOR ID: 702034
Tpau_2321,
Tpau_2322,
Tpau_2323
View Structure
7 2430909-2431010 (-)glycine2428001-2430821 (-)Tpau_2334

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))
Tpau_2334Operon

DOOR ID: 702036
Tpau_2331,
Tpau_2332,
Tpau_2333,
Tpau_2334
View Structure
8 2592145-2592315 (-)ykoK2591779-2591917 (-)Tpau_2498

Tpau_2498Single gene

DOOR ID: 2852893
Tpau_2498 View Structure
9 2658696-2658854 (-)FMN2658017-2658641 (-)Tpau_2562

Riboflavin synthase; alpha subunit
Tpau_2562Operon

DOOR ID: 702086
Tpau_2559,
Tpau_2560,
Tpau_2561,
Tpau_2562
View Structure
10 2791931-2792094 (-)ydaO-yuaA2791216-2791915 (-)Tpau_2684

NLP/P60 protein
Tpau_2684Single gene

DOOR ID: 2852930
Tpau_2684 View Structure
11 3267130-3267194 (+)ykkC-III3267211-3267526 (+)Tpau_3160

Tpau_3160operon

DOOR ID: 702214
Tpau_3159,
Tpau_3160
View Structure
12 3417963-3418138 (+)ykoK3418410-3419133 (+)Tpau_3323

MgtC/SapB transporter
Tpau_3323Operon

DOOR ID: 702250
Tpau_3323,
Tpau_3324,
Tpau_3325
View Structure
13 3854279-3854390 (+)TPP3856083-3856971 (+)Tpau_3738

Phosphomethylpyrimidine kinase
Tpau_3738Operon

DOOR ID: 702335
Tpau_3737,
Tpau_3738,
Tpau_3739
View Structure
14 3867156-3867255 (-)TPP3866116-3867145 (-)Tpau_3748

Glycine oxidase ThiO
Tpau_3748Operon

DOOR ID: 702337
Tpau_3746,
Tpau_3747,
Tpau_3748
View Structure