Genome: Thiomonas intermedia K12 (NC_014153.1); Phylum: Betaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 785483-785588 (+)ZMP-ZTP785677-786925 (+)Tint_0723

Serine hydroxymethyltransferase (SHMT) (Serine methylase) 		Tint_0723Single gene

DOOR ID: 2851448		Tint_0723 View Structure
2 1345878-1346010 (+)TPP1346041-1348051 (+)Tint_1260

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		Tint_1260Operon

DOOR ID: 701070		Tint_1260,
Tint_1261,
Tint_1262,
Tint_1263,
Tint_1264		 View Structure
3 1539103-1539336 (+)cobalamin1539492-1541427 (+)Tint_1432

TonB-dependent receptor plug		Tint_1432Operon

DOOR ID: 701106		Tint_1432,
Tint_1433,
Tint_1434		 View Structure
4 1823327-1823396 (+)fluoride1823437-1824382 (+)Tint_1699

Respiratory-chain NADH dehydrogenase subunit 1		Tint_1699Operon

DOOR ID: 701167		Tint_1699,
Tint_1700,
Tint_1701,
Tint_1702,
Tint_1703,
Tint_1704,
Tint_1705,
Tint_1706		 View Structure
5 1838324-1838401 (-)fluoride1836739-1838101 (-)Tint_1711

Cyclopropane-fatty-acyl-phospholipid synthase		Tint_1711Operon

DOOR ID: 701168		Tint_1708,
Tint_1709,
Tint_1710,
Tint_1711		 View Structure
6 2050455-2050627 (-)yybP-ykoY2050039-2050363 (-)Tint_1908

Transposase IS3/IS911 family protein		Tint_1908Single gene

DOOR ID: 2851780		Tint_1908 View Structure
7 2374468-2374587 (-)SAH2372989-2374408 (-)Tint_2219

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)		Tint_2219Operon

DOOR ID: 701269		Tint_2218,
Tint_2219		 View Structure
8 2527310-2527416 (-)TPP2525966-2527253 (-)Tint_2362

Permease for cytosine/purines uracil thiamine allantoin		Tint_2362Single gene

DOOR ID: 2851934		Tint_2362 View Structure
9 2745170-2745280 (-)glycine2743927-2745088 (-)Tint_2573

Glycine cleavage system T protein		Tint_2573Single gene

DOOR ID: 2851991		Tint_2573 View Structure
10 2745284-2745380 (-)glycine2743927-2745088 (-)Tint_2573

Glycine cleavage system T protein		Tint_2573Single gene

DOOR ID: 2851991		Tint_2573 View Structure
11 2891148-2891209 (-)SAH2889167-2890118 (-)Tint_2718

D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein		Tint_2718Operon

DOOR ID: 701378		Tint_2715,
Tint_2716,
Tint_2717,
Tint_2718,
Tint_2719,
Tint_2720,
Tint_2721,
Tint_2722,
Tint_2723,
Tint_2724,
Tint_2725,
Tint_2726,
Tint_2727,
Tint_2728,
Tint_2729,
Tint_2730,
Tint_2731		 View Structure
12 2973273-2973352 (+)SAH2973396-2976129 (+)Tint_2807

Methionine synthase (3) (5-methyltetrahydrofolate--homocysteine methyltransferase)		Tint_2807Single gene

DOOR ID: 2852053		Tint_2807 View Structure