Genome: Burkholderia sp. CCGE1002 chromosome I (NC_014117.1); Phylum: Betaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 587513-587639 (+)ZMP-ZTP587817-589065 (+)BC1002_0530

Serine hydroxymethyltransferase (SHMT) (Serine methylase)
BC1002_0530Operon

DOOR ID: 693980
BC1002_0530,
BC1002_0531
View Structure
2 780847-781112 (+)cobalamin781200-783132 (+)BC1002_0713

TonB-dependent receptor
BC1002_0713Operon

DOOR ID: 694019
BC1002_0713,
BC1002_0714,
BC1002_0715,
BC1002_0716,
BC1002_0717,
BC1002_0718
View Structure
3 1024589-1024635 (+)mini-ykkC1024655-1024976 (+)BC1002_0924

BC1002_0924Single gene

DOOR ID: 2838061
BC1002_0924 View Structure
4 1284628-1284689 (-)fluoride1284174-1284555 (-)BC1002_1152

Putative fluoride ion transporter CrcB
BC1002_1152Single gene

DOOR ID: 2838158
BC1002_1152 View Structure
5 2201077-2201194 (+)TPP2201282-2203214 (+)BC1002_1962

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
BC1002_1962Single gene

DOOR ID: 2838556
BC1002_1962 View Structure
6 2553759-2553971 (+)yybP-ykoY2554556-2555240 (-)BC1002_2282

Putative transmembrane lipoprotein
BC1002_2282Single gene

DOOR ID: 2838694
BC1002_2282 View Structure
7 2855235-2855334 (+)ykkC-yxkD2855391-2856462 (+)BC1002_2561

ABC transporter periplasmic binding protein; urea carboxylase region
BC1002_2561Operon

DOOR ID: 694349
BC1002_2561,
BC1002_2562,
BC1002_2563,
BC1002_2564,
BC1002_2565,
BC1002_2566,
BC1002_2567,
BC1002_2568
View Structure
8 2859630-2859676 (+)mini-ykkC2859697-2863297 (+)BC1002_2567

BC1002_2567Operon

DOOR ID: 694349
BC1002_2561,
BC1002_2562,
BC1002_2563,
BC1002_2564,
BC1002_2565,
BC1002_2566,
BC1002_2567,
BC1002_2568
View Structure
9 2889885-2890068 (-)FMN2889018-2889738 (-)BC1002_2592

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
BC1002_2592Single gene

DOOR ID: 2838853
BC1002_2592 View Structure
10 2931418-2931514 (-)glycine2930219-2930714 (-)BC1002_2633

Gluconokinase (2)
BC1002_2633Operon

DOOR ID: 694362
BC1002_2633,
BC1002_2634
View Structure
11 3142091-3142214 (-)TPP3140738-3141869 (-)BC1002_2833

FAD dependent oxidoreductase
BC1002_2833Operon

DOOR ID: 694405
BC1002_2832,
BC1002_2833
View Structure
12 3290314-3290448 (-)SAH3288861-3290280 (-)BC1002_2974

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
BC1002_2974Single gene

DOOR ID: 2838985
BC1002_2974 View Structure
13 3403719-3403821 (+)glycine3404081-3405200 (+)BC1002_3085

Aminomethyltransferase (0) (Glycine cleavage system T protein)
BC1002_3085Operon

DOOR ID: 694458
BC1002_3085,
BC1002_3086,
BC1002_3087
View Structure
14 3403841-3404001 (+)glycine3404081-3405200 (+)BC1002_3085

Aminomethyltransferase (0) (Glycine cleavage system T protein)
BC1002_3085Operon

DOOR ID: 694458
BC1002_3085,
BC1002_3086,
BC1002_3087
View Structure