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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
132187-132283
(+)
TPP
132469-132673 (+)
ZPR_0136
Thiamine biosynthesis protein
ZPR_0136
Single gene
DOOR ID:
2830115
ZPR_0136
View Structure
2
2121043-2121135
(-)
TPP
2120193-2120988 (-)
ZPR_1976
Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
ZPR_1976
Operon
DOOR ID:
690802
ZPR_1973,
ZPR_1974,
ZPR_1975,
ZPR_1976
View Structure
3
2204171-2204429
(+)
cobalamin
2204460-2206296 (+)
ZPR_2060
TonB-dependent outer membrane receptor
ZPR_2060
Operon
DOOR ID:
690819
ZPR_2060,
ZPR_2061,
ZPR_2062
View Structure
4
3186765-3186908
(-)
AdoCbl
3185685-3186660 (-)
ZPR_2944
Ribonucleotide reductase
ZPR_2944
Operon
DOOR ID:
691013
ZPR_2943,
ZPR_2944
View Structure
5
3464825-3465037
(-)
cobalamin
3463569-3464718 (-)
ZPR_3186
Putative cell surface protein
ZPR_3186
Single gene
DOOR ID:
2831183
ZPR_3186
View Structure
6
3914170-3914271
(-)
SAM
3910659-3913926 (-)
ZPR_3623
Aspartokinase I/homoserine dehydrogenase; threonine-sensitive
ZPR_3623
Single gene
DOOR ID:
2831327
ZPR_3623
View Structure
7
3919459-3919569
(-)
SAM
3918390-3919410 (-)
ZPR_3626
Methionine synthase-like protein
ZPR_3626
Operon
DOOR ID:
691161
ZPR_3624,
ZPR_3625,
ZPR_3626
View Structure
8
4806104-4806192
(-)
TPP
4803593-4805993 (-)
ZPR_4457
TonB-dependent outer membrane receptor
ZPR_4457
Single gene
DOOR ID:
2831597
ZPR_4457
View Structure
Genome:
Zunongwangia profunda SM-A87
(
NC_014041.1
);
Phylum:
Bacteroidetes/Chlorobi group
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