Genome: Yersinia pestis Z176003 (NC_014029.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 420557-420603 (+)mini-ykkC421101-421458 (-)frdD

YPZ3_0357Operon

DOOR ID: 687134
YPZ3_0357 (frdD),
YPZ3_0358 (frdC),
YPZ3_0359 (frdB),
YPZ3_0360 (frdA)
View Structure
2 620555-620692 (-)TPP619487-620534 (-)YPZ3_0507

YPZ3_0507Operon

DOOR ID: 687163
YPZ3_0505,
YPZ3_0506 (cysU),
YPZ3_0507
View Structure
3 769221-769410 (+)FMN769651-770305 (+)ribB

YPZ3_0616Single gene

DOOR ID: 2824486
YPZ3_0616 (ribB) View Structure
4 1355929-1356075 (+)MOCO1356190-1357042 (+)moaA

YPZ3_1050Operon

DOOR ID: 687269
YPZ3_1050 (moaA),
YPZ3_1051 (moaC)
View Structure
5 2509982-2510181 (+)yybP-ykoY2510191-2510761 (+)YPZ3_1964

YPZ3_1964Single gene

DOOR ID: 2825145
YPZ3_1964 View Structure
6 2974751-2974814 (-)fluoride2974266-2974650 (-)ccrB

YPZ3_2292Single gene

DOOR ID: 2825326
YPZ3_2292 (ccrB) View Structure
7 3184036-3184140 (+)TPP3184263-3185064 (+)thiD

YPZ3_2465Single gene

DOOR ID: 2825396
YPZ3_2465 (thiD) View Structure
8 4237137-4237262 (+)TPP4237395-4239441 (+)thiC

YPZ3_3299Operon

DOOR ID: 687696
YPZ3_3299 (thiC),
YPZ3_3300,
YPZ3_3301 (thiF)
View Structure
9 4439379-4439641 (-)cobalamin4437414-4439310 (-)YPZ3_3451

YPZ3_3451Single gene

DOOR ID: 2825839
YPZ3_3451 View Structure