RiboswitchDB

Genome: Candidatus Puniceispirillum marinum IMCC1322 (NC_014010.1); Phylum: Alphaproteobacteria

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

608333-608562 (-)

cobalamin

607603-608236 (-)

SAR116_0573

Hydrogenase accessory protein (6)

Single gene

DOOR ID: 2817868

SAR116_0573

2

1484209-1484326 (+)

glycine

1484490-1485621 (+)

SAR116_1344

Putative aminomethyltransferase (Glycine cleavage system t protein) (0)

Operon

DOOR ID: 684384

SAR116_1344,
SAR116_1345,
SAR116_1346

3

2181919-2182019 (-)

TPP

2181065-2181872 (-)

SAR116_1977

Phosphomethylpyrimidine kinase

Operon

DOOR ID: 684524

SAR116_1967,
SAR116_1968,
SAR116_1969,
SAR116_1970,
SAR116_1971,
SAR116_1972,
SAR116_1973,
SAR116_1974,
SAR116_1975,
SAR116_1976,
SAR116_1977

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";}}