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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
302562-302662
(-)
TPP
300537-302472 (-)
thiC
EAM_0240
Operon
DOOR ID:
681389
EAM_0239
(thiE)
,
EAM_0240
(thiC)
View Structure
2
322473-322662
(-)
lysine
321025-322378 (-)
lysC
EAM_0253
Single gene
DOOR ID:
2813430
EAM_0253
(lysC)
View Structure
3
764788-764883
(-)
TPP
763762-764749 (-)
tbpA
EAM_0677
Operon
DOOR ID:
681474
EAM_0675
(thiQ)
,
EAM_0676
(thiP)
,
EAM_0677
(tbpA)
View Structure
4
1016575-1016645
(+)
fluoride
1016727-1017105 (+)
crcB
EAM_0905
Single gene
DOOR ID:
2813664
EAM_0905
(crcB)
View Structure
5
1325446-1325580
(+)
MOCO
1326572-1327088 (+)
moaB
EAM_1219
Operon
DOOR ID:
681579
EAM_1218
(moaA)
,
EAM_1219
(moaB)
,
EAM_1220
(moaC)
,
EAM_1221
(moaD)
,
EAM_1222
(moaE)
,
EAM_1223
View Structure
6
2245464-2245566
(+)
TPP
2245622-2245811 (+)
EAM_2093
EAM_2093
Single gene
DOOR ID:
2814167
EAM_2093
View Structure
7
2361172-2361273
(-)
TPP
2360345-2361137 (-)
thiM
EAM_2193
Operon
DOOR ID:
681758
EAM_2192
(thiD)
,
EAM_2193
(thiM)
View Structure
8
3275111-3275259
(-)
FMN
3274346-3275003 (-)
ribB
EAM_2992
Single gene
DOOR ID:
2814511
EAM_2992
(ribB)
View Structure
Genome:
Erwinia amylovora ATCC 49946
(
NC_013971.1
);
Phylum:
Gammaproteobacteria
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