Genome: Stackebrandtia nassauensis DSM 44728 (NC_013947.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 290072-290273 (+)cobalamin290312-290843 (+)Snas_0276

Thioesterase superfamily protein
Snas_0276Operon

DOOR ID: 676617
Snas_0276,
Snas_0277
View Structure
2 452900-453004 (+)SAM453057-454314 (+)Snas_0445

Threonine synthase
Snas_0445Single gene

DOOR ID: 2803312
Snas_0445 View Structure
3 648892-648996 (+)ZMP-ZTP649043-650600 (+)Snas_0614

Bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (0) (ATIC) (IMP synthase) (Inosinicase)]
Snas_0614Operon

DOOR ID: 676678
Snas_0614,
Snas_0615
View Structure
4 966660-966770 (+)TPP967425-968475 (+)Snas_0912

Glycine oxidase ThiO
Snas_0912Operon

DOOR ID: 676746
Snas_0911,
Snas_0912
View Structure
5 1209062-1209220 (+)ydaO-yuaA1209298-1210201 (+)Snas_1132

Snas_1132Single gene

DOOR ID: 2803565
Snas_1132 View Structure
6 1511887-1512039 (-)ydaO-yuaA1510974-1511880 (-)Snas_1427

NLP/P60 protein
Snas_1427Single gene

DOOR ID: 2803634
Snas_1427 View Structure
7 2169991-2170093 (-)TPP2169367-2169955 (-)Snas_2046

Membrane protein-like protein
Snas_2046Operon

DOOR ID: 676993
Snas_2044,
Snas_2045,
Snas_2046
View Structure
8 2736585-2736713 (+)FMN2736810-2737392 (+)Snas_2597

Riboflavin synthase; alpha subunit
Snas_2597Operon

DOOR ID: 677109
Snas_2597,
Snas_2598,
Snas_2599
View Structure
9 3249393-3249469 (+)SAH3249581-3251036 (+)Snas_3079

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
Snas_3079Single gene

DOOR ID: 2804209
Snas_3079 View Structure
10 3279246-3279403 (+)cobalamin3279523-3280732 (+)Snas_3108

LPXTG-motif cell wall anchor domain protein
Snas_3108Operon

DOOR ID: 677213
Snas_3108,
Snas_3109,
Snas_3110,
Snas_3111,
Snas_3112
View Structure
11 3988935-3989043 (-)glycine3986051-3988880 (-)Snas_3739

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))
Snas_3739Operon

DOOR ID: 677339
Snas_3738,
Snas_3739
View Structure
12 3989044-3989149 (-)glycine3986051-3988880 (-)Snas_3739

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))
Snas_3739Operon

DOOR ID: 677339
Snas_3738,
Snas_3739
View Structure
13 4287332-4287483 (+)ydaO-yuaA4287491-4288487 (+)Snas_4018

Snas_4018Single gene

DOOR ID: 2804538
Snas_4018 View Structure
14 5370969-5371116 (+)cobalamin5371253-5373503 (+)Snas_5060

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)
Snas_5060Single gene

DOOR ID: 2804900
Snas_5060 View Structure
15 6241706-6241864 (-)ydaO-yuaA6240745-6241693 (-)Snas_5880

NLP/P60 protein
Snas_5880Single gene

DOOR ID: 2805229
Snas_5880 View Structure
16 6342663-6342780 (+)SAM-IV6342813-6344217 (+)Snas_5990

Cysteine desulfurase
Snas_5990Operon

DOOR ID: 677836
Snas_5990,
Snas_5991
View Structure
17 6676657-6676795 (-)cobalamin6675685-6676579 (-)Snas_6329

Periplasmic binding protein
Snas_6329Operon

DOOR ID: 677900
Snas_6327,
Snas_6328,
Snas_6329
View Structure