Genome: Denitrovibrio acetiphilus DSM 12809 (NC_013943.1); Phylum: Deferribacteres
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 164679-164880 (+)cobalamin164953-165913 (+)Dacet_0164

Sirohydrochlorin cobaltochelatase
Dacet_0164Operon

DOOR ID: 675281
Dacet_0164,
Dacet_0165,
Dacet_0166,
Dacet_0167,
Dacet_0168,
Dacet_0169,
Dacet_0170
View Structure
2 1710988-1711123 (-)cobalamin1708596-1710864 (-)Dacet_1634

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)
Dacet_1634Single gene

DOOR ID: 2801847
Dacet_1634 View Structure
3 2154581-2154630 (+)mini-ykkC2154651-2154969 (+)Dacet_2040

Dacet_2040Single gene

DOOR ID: 2801963
Dacet_2040 View Structure
4 2458198-2458283 (-)ZMP-ZTP2456898-2458137 (-)Dacet_2325

Serine hydroxymethyltransferase (SHMT) (Serine methylase)
Dacet_2325Single gene

DOOR ID: 2802031
Dacet_2325 View Structure
5 2663761-2663902 (+)FMN2663955-2664582 (+)Dacet_2520

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
Dacet_2520Operon

DOOR ID: 675782
Dacet_2520,
Dacet_2521
View Structure
6 2913281-2913390 (-)SAM2911932-2913213 (-)Dacet_2739

O-acetylhomoserine/O-acetylserine sulfhydrylase (9)
Dacet_2739Operon

DOOR ID: 675829
Dacet_2737,
Dacet_2738,
Dacet_2739
View Structure
7 3192888-3192985 (+)TPP3193361-3194633 (+)Dacet_2991

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
Dacet_2991Operon

DOOR ID: 675887
Dacet_2991,
Dacet_2992,
Dacet_2993
View Structure