Genome: Xenorhabdus bovienii SS-2004 (NC_013892.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 984259-984415 (-)MOCO982774-983254 (-)moaC

Cyclic pyranopterin monophosphate synthase (7) (Molybdenum cofactor biosynthesis protein C)

DOOR ID: 668408
XBJ1_0976 (moaE),
XBJ1_0977 (moaD),
XBJ1_0978 (moaC),
XBJ1_0979 (moaA)
View Structure
2 1778111-1778317 (-)FMN1777341-1777995 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
XBJ1_1819Single gene

DOOR ID: 2788591
XBJ1_1819 (ribB) View Structure
3 2538665-2538865 (+)yybP-ykoY2538872-2539457 (+)yebN

Putative manganese efflux pump MntP
XBJ1_2569Single gene

DOOR ID: 2788902
XBJ1_2569 (yebN) View Structure
4 2721087-2721179 (-)TPP2719989-2720160 (+)XBJ1_2738

XBJ1_2738Single gene

DOOR ID: 2788966
XBJ1_2738 View Structure
5 3471071-3471117 (-)mini-ykkC3470728-3471043 (-)sugE

XBJ1_3562Single gene

DOOR ID: 2789332
XBJ1_3562 (sugE) View Structure
6 3585516-3585619 (-)TPP3584428-3585442 (-)tbpA

Thiamin transport protein (ABC superfamily; peri_bind)

DOOR ID: 668898
XBJ1_3685 (thiQ),
XBJ1_3686 (thiP),
XBJ1_3687 (tbpA)
View Structure
7 3874599-3874723 (+)TPP3874880-3876854 (+)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)

DOOR ID: 668966
XBJ1_4028 (thiC),
XBJ1_4029 (thiE),
XBJ1_4030 (thiF),
XBJ1_4031 (thiS),
XBJ1_4032 (thiG),
XBJ1_4033 (thiH)
View Structure