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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
144749-144847
(-)
TPP
142781-144671 (-)
TK90_0140
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
TK90_0140
Single gene
DOOR ID:
2786019
TK90_0140
View Structure
2
843872-844121
(+)
cobalamin
844262-846107 (+)
TK90_0790
TonB-dependent receptor
TK90_0790
Operon
DOOR ID:
666935
TK90_0790,
TK90_0791
View Structure
3
867962-868196
(-)
cobalamin
866717-867833 (-)
TK90_0811
Phosphate-selective porin O and P
TK90_0811
Operon
DOOR ID:
666939
TK90_0810,
TK90_0811
View Structure
4
1553021-1553216
(-)
cobalamin
1552202-1552925 (-)
TK90_1459
Cob(II)yrinic acid a;c-diamide reductase
TK90_1459
Operon
DOOR ID:
667068
TK90_1453,
TK90_1454,
TK90_1455,
TK90_1456,
TK90_1457,
TK90_1458,
TK90_1459
View Structure
5
1781337-1781480
(+)
yybP-ykoY
1781597-1782233 (+)
TK90_1664
TK90_1664
Single gene
DOOR ID:
2786498
TK90_1664
View Structure
6
1841741-1841850
(-)
glycine
1840520-1841618 (-)
TK90_1720
Aminomethyltransferase (0) (Glycine cleavage system T protein)
TK90_1720
Operon
DOOR ID:
667124
TK90_1716,
TK90_1717,
TK90_1718,
TK90_1719,
TK90_1720
View Structure
7
1841852-1841953
(-)
glycine
1840520-1841618 (-)
TK90_1720
Aminomethyltransferase (0) (Glycine cleavage system T protein)
TK90_1720
Operon
DOOR ID:
667124
TK90_1716,
TK90_1717,
TK90_1718,
TK90_1719,
TK90_1720
View Structure
8
2513023-2513104
(+)
SAH
2513123-2514536 (+)
TK90_2392
Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
TK90_2392
Single gene
DOOR ID:
2786681
TK90_2392
View Structure
Genome:
Thioalkalivibrio sp. K90mix
(
NC_013889.1
);
Phylum:
Gammaproteobacteria
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