Genome: Allochromatium vinosum DSM 180 (NC_013851.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 65792-65899 (-)TPP63722-65615 (-)Alvin_0058

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
Alvin_0058Operon

DOOR ID: 663255
Alvin_0056,
Alvin_0057,
Alvin_0058
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2 384845-384937 (+)SAH384958-386365 (+)Alvin_0320

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
Alvin_0320Operon

DOOR ID: 663316
Alvin_0320,
Alvin_0321
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3 995402-995636 (-)cobalamin993360-995232 (-)Alvin_0852

TonB-dependent vitamin B12 receptor
Alvin_0852Operon

DOOR ID: 663435
Alvin_0849,
Alvin_0850,
Alvin_0851,
Alvin_0852
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4 1056403-1056493 (-)glycine1055115-1056210 (-)Alvin_0915

Aminomethyltransferase (0) (Glycine cleavage system T protein)
Alvin_0915Operon

DOOR ID: 663450
Alvin_0910,
Alvin_0911,
Alvin_0912,
Alvin_0913,
Alvin_0914,
Alvin_0915
View Structure
5 1763159-1763303 (-)yybP-ykoY1762419-1763016 (-)Alvin_1520

Alvin_1520Single gene

DOOR ID: 2780240
Alvin_1520 View Structure