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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
675285-675375
(-)
THF
674677-675249 (-)
GALLO_0651
GALLO_0651
Single gene
DOOR ID:
2776556
GALLO_0651
View Structure
2
717526-717775
(+)
FMN
717982-719049 (+)
ribD
GALLO_0692
Operon
DOOR ID:
660937
GALLO_0692
(ribD)
,
GALLO_0693
(ribE)
,
GALLO_0694
(ribA)
,
GALLO_0695
(ribH)
View Structure
3
727750-727847
(-)
TPP
727107-727688 (-)
GALLO_0703
GALLO_0703
Single gene
DOOR ID:
2776576
GALLO_0703
View Structure
4
817522-817634
(+)
preQ1-II
818251-820210 (+)
ligA
GALLO_0779
Operon
DOOR ID:
660953
GALLO_0779
(ligA)
,
GALLO_0780,
GALLO_0781,
GALLO_0782,
GALLO_0783,
GALLO_0784,
GALLO_0785,
GALLO_0786
View Structure
5
1083517-1083612
(+)
purine
1083776-1084368 (+)
xpt
GALLO_1029
Operon
DOOR ID:
661005
GALLO_1029
(xpt)
,
GALLO_1030
View Structure
6
1253202-1253291
(-)
TPP
1252446-1253035 (-)
thiW
GALLO_1184
Operon
DOOR ID:
661041
GALLO_1178
(thiE)
,
GALLO_1179
(thiM)
,
GALLO_1180
(thiD)
,
GALLO_1181
(tenA)
,
GALLO_1182,
GALLO_1183,
GALLO_1184
(thiW)
View Structure
7
1261518-1261709
(+)
glycine
1261819-1263166 (+)
GALLO_1191
GALLO_1191
Single gene
DOOR ID:
2776729
GALLO_1191
View Structure
8
1866752-1867011
(-)
FMN
1866100-1866685 (-)
GALLO_1792
GALLO_1792
Single gene
DOOR ID:
2776914
GALLO_1792
View Structure
Genome:
Streptococcus gallolyticus UCN34
(
NC_013798.1
);
Phylum:
Firmicutes
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