Genome: Xanthomonas albilineans GPE PC73 (NC_013722.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 120191-120320 (-)yybP-ykoY119569-120145 (-)XALc_0089

Putative manganese efflux pump MntP
XALc_0089Single gene

DOOR ID: 2754853
XALc_0089 View Structure
2 204493-204712 (+)cobalamin204891-207303 (+)nrdA

Ribonucleoside-diphosphate reductase

DOOR ID: 650243
XALc_0161 (nrdA),
XALc_0162 (nrdB),
View Structure
3 217845-218098 (-)cobalamin215342-217634 (-)metE

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)
XALc_0169Single gene

DOOR ID: 2754889
XALc_0169 (metE) View Structure
4 707468-707570 (+)glycine708084-709377 (+)purA

Adenylosuccinate synthetase (AMPSase) (AdSS) (IMP--aspartate ligase)
XALc_0657Single gene

DOOR ID: 2755071
XALc_0657 (purA) View Structure
5 842197-842297 (+)TPP842406-844290 (+)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
XALc_0761Single gene

DOOR ID: 2755117
XALc_0761 (thiC) View Structure
6 996181-996288 (+)glycine996386-999290 (+)gcvP

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))
XALc_0878Single gene

DOOR ID: 2755172
XALc_0878 (gcvP) View Structure
7 1682310-1682380 (+)fluoride1682460-1683804 (+)XALc_1455

Putative chloride channel protein
XALc_1455Single gene

DOOR ID: 2755383
XALc_1455 View Structure
8 2581013-2581131 (-)SAM2579895-2580942 (-)XALc_2186

Putative homoserine o-acetyltransferase protein

DOOR ID: 650652
XALc_2185 (metC),
View Structure
9 3226714-3226937 (+)cobalamin3227050-3228922 (+)XALc_2726

Putative tonb-dependent outer membrane receptor protein
XALc_2726Single gene

DOOR ID: 2755898
XALc_2726 View Structure
10 3307533-3307633 (+)SAH3307667-3309113 (+)XALc_2790

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
XALc_2790Single gene

DOOR ID: 2755927
XALc_2790 View Structure
11 3362618-3362777 (-)FMN3361940-3362540 (-)RibC

Putative riboflavin synthase; alpha subunit protein
XALc_2839Single gene

DOOR ID: 2755946
XALc_2839 (RibC) View Structure