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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
1589853-1590009
(-)
cobalamin
1586867-1589705 (-)
Psta_1278
Ribonucleoside-diphosphate reductase
Psta_1278
Single gene
DOOR ID:
2752281
Psta_1278
View Structure
2
2640943-2641139
(-)
cobalamin
2638855-2640904 (-)
Psta_2050
TonB-dependent receptor plug
Psta_2050
Single gene
DOOR ID:
2752710
Psta_2050
View Structure
3
2667852-2667960
(+)
c-di-GMP-I
2668204-2668393 (+)
Psta_2070
Flp/Fap pilin component
Psta_2070
single gene
DOOR ID:
2752726
Psta_2070
View Structure
4
3985785-3985974
(-)
cobalamin
3983373-3985641 (-)
Psta_3080
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)
Psta_3080
Single gene
DOOR ID:
2753318
Psta_3080
View Structure
Genome:
Pirellula staleyi DSM 6068
(
NC_013720.1
);
Phylum:
Planctomycetes
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