Genome: Citrobacter rodentium ICC168 (NC_013716.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 91068-91189 (-)TPP90052-90997 (-)thiB

Thiamine ABC transport system; substrate-binding protein

DOOR ID: 648172
ROD_00731 (thiQ),
ROD_00741 (thiP),
ROD_00751 (thiB)
View Structure
2 863051-863192 (+)MOCO864187-864700 (+)moaB

Molybdenum cofactor biosynthesis protein B

DOOR ID: 648311
ROD_07821 (moaA),
ROD_07831 (moaB),
ROD_07841 (moaC),
ROD_07851 (moaD),
ROD_07861 (moaE)
View Structure
3 1980012-1980115 (+)yybP-ykoY1980229-1980796 (+)ROD_18591

Putative manganese efflux pump MntP
ROD_18591Single gene

DOOR ID: 2750533
ROD_18591 View Structure
4 2221956-2222131 (-)cobalamin2220667-2221792 (-)cbiA

Cobyrinic acid A;C-diamide synthase
ROD_21201Single gene

DOOR ID: 2750636
ROD_21201 (cbiA) View Structure
5 2338769-2338866 (-)TPP2337152-2337953 (-)thiD

Phosphomethylpyrimidine kinase

DOOR ID: 648556
ROD_22271 (thiD),
ROD_22281 (thiM)
View Structure
6 3389829-3389873 (+)mini-ykkC3389890-3390208 (+)sugE

ROD_32131Single gene

DOOR ID: 2750957
ROD_32131 (sugE) View Structure
7 3496760-3496874 (+)Mg sensor3496949-3499682 (+)mgtA

Mg(2+) transport ATPase; P-type
ROD_33131Single gene

DOOR ID: 2751004
ROD_33131 (mgtA) View Structure
8 3782719-3782868 (-)FMN3781959-3782613 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
ROD_35901Single gene

DOOR ID: 2751091
ROD_35901 (ribB) View Structure
9 3947555-3947706 (+)TPP3947793-3949689 (+)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)

DOOR ID: 648848
ROD_37581 (thiC),
ROD_37591 (thiE),
ROD_37601 (thiF),
ROD_37621 (thiG),
ROD_37631 (thiH)
View Structure
10 3979922-3980116 (-)cobalamin3978018-3979857 (-)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)

DOOR ID: 648854
ROD_37781 (murI),
ROD_37791 (btuB)
View Structure
11 4106537-4106606 (-)SAH4104547-4105597 (+)glnL

Nitrogen regulation protein NR(II) (Two-component system sensor kinase)

DOOR ID: 648877
ROD_38921 (glnL),
ROD_38931 (glnG)
View Structure