Genome: Lactococcus lactis subsp. lactis KF147 (NC_013656.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 272644-272716 (+)fluoride272794-274084 (+)enoA

Enolase (1) (2-phospho-D-glycerate hydro-lyase) (2-phosphoglycerate dehydratase)
LLKF_0273Single gene

DOOR ID: 2745510
LLKF_0273 (enoA) View Structure
2 363747-363846 (-)TPP363151-363700 (-)thiA

Thiamine transporter
LLKF_0371Single gene

DOOR ID: 2745537
LLKF_0371 (thiA) View Structure
3 834393-834498 (+)preQ1-II835108-835741 (+)yiaD

NADH-flavin reductase
LLKF_0816Single gene

DOOR ID: 2745715
LLKF_0816 (yiaD) View Structure
4 942865-943025 (+)ykoK943405-944605 (+)ftsW

Cell division protein FtsW

DOOR ID: 646523
LLKF_0913 (ftsW),
LLKF_0914 (yjaJ)
View Structure
5 1051341-1051457 (+)FMN1051638-1052727 (+)ribG

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]

DOOR ID: 646543
LLKF_1015 (ribG),
LLKF_1016 (ribB),
LLKF_1017 (ribA),
LLKF_1018 (ribH)
View Structure
6 1132411-1132485 (+)fluoride1132576-1133788 (+)eriC

Chloride channel protein; ClC family
LLKF_1125Single gene

DOOR ID: 2745820
LLKF_1125 (eriC) View Structure
7 1185066-1185163 (+)purine1185274-1185868 (+)xpt

Xanthine phosphoribosyltransferase (XPRTase) (2)

DOOR ID: 646576
LLKF_1171 (xpt),
LLKF_1172 (pbuX)
View Structure
8 1378636-1378796 (-)ykoK1375645-1378378 (-)mgtA

Mg(2+) transport ATPase; P-type
LLKF_1322Single gene

DOOR ID: 2745880
LLKF_1322 (mgtA) View Structure
9 1385771-1385873 (-)TPP1384937-1385690 (-)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)

DOOR ID: 646604
LLKF_1328 (thiE),
LLKF_1329 (thiD),
LLKF_1330 (thiM)
View Structure
10 1397607-1397743 (-)FMN1394905-1396723 (-)ynaD

Multidrug resistance ABC transporter; ATP-binding and permease protein

DOOR ID: 646608
LLKF_1338 (ynaC),
LLKF_1339 (ynaD)
View Structure
11 1830974-1831149 (-)lysine1829979-1830873 (-)dapA

4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase)

DOOR ID: 646691
LLKF_1772 (dapA),
LLKF_1774 (yqgC),
LLKF_1775 (asd)
View Structure
12 1923906-1924075 (-)ykoK1922091-1923891 (-)LLKF_1858

ABC transporter; permease protein

DOOR ID: 646704
View Structure
13 2499729-2499911 (+)lysine2500014-2501535 (+)lysP

Lysine-specific permease
LLKF_2438Single gene

DOOR ID: 2746296
LLKF_2438 (lysP) View Structure