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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
137897-138007
(-)
TPP
137099-137846 (-)
Tnap_0143
Thiamine thiazole synthase
Tnap_0143
Operon
DOOR ID:
645101
Tnap_0137,
Tnap_0138,
Tnap_0139,
Tnap_0140,
Tnap_0141,
Tnap_0142,
Tnap_0143
View Structure
2
735824-736007
(-)
cobalamin
734877-735771 (-)
Tnap_0710
Periplasmic binding protein
Tnap_0710
Operon
DOOR ID:
645221
Tnap_0708,
Tnap_0709,
Tnap_0710
View Structure
3
1039219-1039340
(+)
FMN
1039399-1040446 (+)
Tnap_0999
Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
Tnap_0999
Operon
DOOR ID:
645274
Tnap_0999,
Tnap_1000,
Tnap_1001,
Tnap_1002,
Tnap_1003
View Structure
4
1305416-1305595
(+)
lysine
1305682-1306660 (+)
Tnap_1286
Aspartate-semialdehyde dehydrogenase (1)
Tnap_1286
Operon
DOOR ID:
645320
Tnap_1286,
Tnap_1287,
Tnap_1288,
Tnap_1289,
Tnap_1290,
Tnap_1291,
Tnap_1292,
Tnap_1293
View Structure
5
1780156-1780219
(+)
fluoride
1780259-1781777 (+)
Tnap_1786
DNA mismatch repair protein MutS domain protein
Tnap_1786
Operon
DOOR ID:
645407
Tnap_1786,
Tnap_1787
View Structure
Genome:
Thermotoga naphthophila RKU-10
(
NC_013642.1
);
Phylum:
Thermotogae
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